Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU171136 |
| length | 1088 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G136177 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 16538062 ~ 16539149 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0009123 | nucleoside monophosphate metabolic process | biological_process |
| GO:0009124 | nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009126 | purine nucleoside monophosphate metabolic process | biological_process |
| GO:0009127 | purine nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009156 | ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:0009161 | ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009167 | purine ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:1990351 | transporter complex | cellular_component |
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:1902495 | transmembrane transporter complex | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU170969 | lncRNA | upstream | 341948 | 16193975 ~ 16196114 (+) | True | G136051 |
| TU170957 | lncRNA | upstream | 365967 | 16171739 ~ 16172095 (+) | True | G136040 |
| TU170940 | lncRNA | upstream | 401347 | 16131831 ~ 16136715 (+) | True | AMCG00012324 |
| TU170939 | lncRNA | upstream | 434758 | 16102894 ~ 16103304 (+) | True | G136025 |
| TU170591 | lncRNA | upstream | 637441 | 15879134 ~ 15900621 (+) | False | G135779 |
| TU171150 | lncRNA | downstream | 26750 | 16565899 ~ 16566231 (+) | True | G136191 |
| TU171156 | lncRNA | downstream | 81106 | 16620255 ~ 16632264 (+) | True | G136195 |
| TU171166 | lncRNA | downstream | 104608 | 16643757 ~ 16648562 (+) | False | AMCG00012348 |
| TU171207 | lncRNA | downstream | 220704 | 16759853 ~ 16765108 (+) | True | AMCG00012351 |
| TU171209 | lncRNA | downstream | 289901 | 16829050 ~ 16831802 (+) | True | G136236 |
| AMCG00012343 | mRNA | upstream | 817 | 16530753 ~ 16537245 (+) | True | AMCG00012343 |
| AMCG00012342 | mRNA | upstream | 20441 | 16513859 ~ 16517621 (+) | True | AMCG00012342 |
| AMCG00012338 | mRNA | upstream | 105975 | 16431673 ~ 16432087 (+) | False | AMCG00012338 |
| AMCG00012336 | mRNA | upstream | 135865 | 16400490 ~ 16402197 (+) | True | AMCG00012336 |
| AMCG00012337 | mRNA | upstream | 159075 | 16367429 ~ 16378987 (+) | True | AMCG00012337 |
| AMCG00012348 | mRNA | downstream | 21500 | 16560649 ~ 16647362 (+) | False | AMCG00012348 |
| AMCG00012347 | mRNA | downstream | 111184 | 16650333 ~ 16670699 (+) | True | AMCG00012347 |
| AMCG00012349 | mRNA | downstream | 151673 | 16690822 ~ 16706193 (+) | True | AMCG00012349 |
| AMCG00012350 | mRNA | downstream | 174197 | 16713346 ~ 16715975 (+) | True | AMCG00012350 |
| AMCG00012351 | mRNA | downstream | 194277 | 16733426 ~ 16764790 (+) | False | AMCG00012351 |
| TU171045 | other | upstream | 105249 | 16393699 ~ 16432813 (+) | True | AMCG00012338 |
| TU171007 | other | upstream | 278730 | 16250248 ~ 16259332 (+) | True | G136076 |
| TU170961 | other | upstream | 355394 | 16176399 ~ 16182668 (+) | False | AMCG00012318 |
| TU170595 | other | upstream | 607214 | 15911248 ~ 15930848 (+) | True | G135781 |
| TU170455 | other | upstream | 914181 | 15119725 ~ 15623881 (+) | True | G135670 |
| TU171165 | other | downstream | 104608 | 16643757 ~ 16648562 (+) | True | AMCG00012348 |
| TU171182 | other | downstream | 135130 | 16674279 ~ 16697391 (+) | False | AMCG00012349 |
| TU171221 | other | downstream | 272557 | 16811706 ~ 16863593 (+) | True | G136245 |
| TU171233 | other | downstream | 327388 | 16866537 ~ 16867448 (+) | True | G136255 |
| TU171236 | other | downstream | 332689 | 16871838 ~ 16875600 (+) | True | G136258 |
