RNA id: TU171463


Basic Information

Item Value
RNA id TU171463
length 257
lncRNA type inter_gene
GC content 0.60
exon number 1
gene id G136437
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17290140 ~ 17290396 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ttcttccgctaaaaatctaggagtcaccctcgatcctgcgctctcctacacccagcacatcaccacgctgacacgcacctgcagattcttcctgagcaacatacgccggatccgtcccttcctcaccgactactcgactcagctgctcgtccagtcactgttcctctcccgcctggatactgcaactccctcctggccggcctgcctgcatccactacccgccgctccagctcatccagaactctgcggctcgtctg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU171461 lncRNA downstream 57 17289099 ~ 17290083 (-) True G136435
TU171449 lncRNA downstream 28246 17259988 ~ 17261894 (-) True G136423
TU171427 lncRNA downstream 48134 17233928 ~ 17242006 (-) False G136408
TU171437 lncRNA downstream 79090 17208778 ~ 17211050 (-) False AMCG00012385
TU171431 lncRNA downstream 91438 17197235 ~ 17198702 (-) True G136411
TU171477 lncRNA upstream 12530 17302926 ~ 17310050 (-) True G136450
TU171500 lncRNA upstream 24512 17314908 ~ 17318479 (-) True G136470
TU171498 lncRNA upstream 60424 17350820 ~ 17351911 (-) True G136469
TU171574 lncRNA upstream 111583 17401979 ~ 17402366 (-) True G136517
TU171575 lncRNA upstream 112041 17402437 ~ 17402721 (-) True G136518
AMCG00012383 mRNA downstream 22829 17264763 ~ 17267311 (-) True AMCG00012383
AMCG00012384 mRNA downstream 35626 17246090 ~ 17254514 (-) True AMCG00012384
AMCG00012385 mRNA downstream 72501 17208815 ~ 17217639 (-) True AMCG00012385
AMCG00012373 mRNA downstream 207933 17080907 ~ 17082207 (-) True AMCG00012373
AMCG00012372 mRNA downstream 210933 17065337 ~ 17079207 (-) False AMCG00012372
AMCG00012390 mRNA upstream 53958 17344354 ~ 17364449 (-) True AMCG00012390
AMCG00012391 mRNA upstream 90260 17380656 ~ 17380934 (-) False AMCG00012391
AMCG00012393 mRNA upstream 127103 17417499 ~ 17423232 (-) False AMCG00012393
AMCG00012394 mRNA upstream 169527 17459923 ~ 17465336 (-) True AMCG00012394
AMCG00012392 mRNA upstream 184978 17475374 ~ 17483359 (-) True AMCG00012392
TU171426 other downstream 47313 17233928 ~ 17242827 (-) True G136408
TU171433 other downstream 75177 17213844 ~ 17214963 (-) False AMCG00012385
TU171434 other downstream 79090 17208778 ~ 17211050 (-) False AMCG00012385
TU171432 other downstream 86907 17201774 ~ 17203233 (-) True G136412
TU171387 other downstream 156233 17093499 ~ 17133907 (-) True G136378
TU171572 other upstream 89784 17380180 ~ 17381595 (-) True AMCG00012391
TU171593 other upstream 126178 17416574 ~ 17434113 (-) True AMCG00012393
TU171623 other upstream 213222 17503618 ~ 17503986 (-) True G136544
TU171745 other upstream 395936 17686332 ~ 17688512 (-) True G136625
TU171807 other upstream 430330 17720726 ~ 17724068 (-) True G136666

Expression Profile