Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU171486 |
| length | 345 |
| lncRNA type | inter_gene |
| GC content | 0.60 |
| exon number | 3 |
| gene id | G136458 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 17339578 ~ 17340736 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko04913 | Ovarian steroidogenesis |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU171485 | lncRNA | upstream | 7008 | 17330794 ~ 17332570 (+) | True | G136457 |
| TU171471 | lncRNA | upstream | 34579 | 17300527 ~ 17304999 (+) | True | G136444 |
| TU171462 | lncRNA | upstream | 49049 | 17290145 ~ 17290529 (+) | True | G136436 |
| TU171337 | lncRNA | upstream | 130219 | 17127155 ~ 17209359 (+) | False | G136341 |
| TU171352 | lncRNA | upstream | 167472 | 17164976 ~ 17172106 (+) | True | G136351 |
| TU171518 | lncRNA | downstream | 44200 | 17384936 ~ 17388799 (+) | False | AMCG00012387 |
| TU171519 | lncRNA | downstream | 44545 | 17385281 ~ 17388799 (+) | False | AMCG00012387 |
| TU171517 | lncRNA | downstream | 44580 | 17385316 ~ 17388799 (+) | True | AMCG00012387 |
| TU171521 | lncRNA | downstream | 61283 | 17402019 ~ 17402360 (+) | True | G136486 |
| TU171536 | lncRNA | downstream | 71025 | 17411761 ~ 17476097 (+) | False | G136489 |
| AMCG00012389 | mRNA | upstream | 49683 | 17269066 ~ 17289895 (+) | True | AMCG00012389 |
| AMCG00012377 | mRNA | upstream | 80979 | 17255412 ~ 17258599 (+) | True | AMCG00012377 |
| AMCG00012379 | mRNA | upstream | 96749 | 17238280 ~ 17242829 (+) | True | AMCG00012379 |
| AMCG00012382 | mRNA | upstream | 104644 | 17231345 ~ 17234934 (+) | True | AMCG00012382 |
| AMCG00012378 | mRNA | upstream | 117164 | 17221383 ~ 17222414 (+) | True | AMCG00012378 |
| AMCG00012388 | mRNA | downstream | 28527 | 17369263 ~ 17371553 (+) | True | AMCG00012388 |
| AMCG00012386 | mRNA | downstream | 34224 | 17374960 ~ 17380121 (+) | True | AMCG00012386 |
| AMCG00012387 | mRNA | downstream | 44824 | 17385560 ~ 17388672 (+) | False | AMCG00012387 |
| AMCG00012395 | mRNA | downstream | 156718 | 17497454 ~ 17504572 (+) | True | AMCG00012395 |
| AMCG00012401 | mRNA | downstream | 168636 | 17509372 ~ 17522821 (+) | True | AMCG00012401 |
| TU171338 | other | upstream | 75174 | 17231376 ~ 17264404 (+) | False | G136341 |
| TU171333 | other | upstream | 104629 | 17231376 ~ 17234949 (+) | False | G136341 |
| TU171339 | other | upstream | 124695 | 17129774 ~ 17214883 (+) | False | G136341 |
| TU171331 | other | upstream | 204748 | 17129980 ~ 17134830 (+) | True | G136341 |
| TU171327 | other | upstream | 210239 | 17126013 ~ 17129339 (+) | True | AMCG00012374 |
| TU171552 | other | downstream | 118748 | 17459484 ~ 17466059 (+) | True | G136499 |
| TU171527 | other | downstream | 133912 | 17474648 ~ 17476097 (+) | False | G136489 |
| TU171630 | other | downstream | 176714 | 17517450 ~ 17518398 (+) | False | AMCG00012401 |
| TU171641 | other | downstream | 206632 | 17547368 ~ 17547968 (+) | True | G136558 |
| TU171661 | other | downstream | 304905 | 17645641 ~ 17646905 (+) | True | G136566 |
