Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU171538 |
| length | 505 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 4 |
| gene id | G136489 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 17411761 ~ 17476097 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU171521 | lncRNA | upstream | 31869 | 17402019 ~ 17402360 (+) | True | G136486 |
| TU171518 | lncRNA | upstream | 45430 | 17384936 ~ 17388799 (+) | False | AMCG00012387 |
| TU171519 | lncRNA | upstream | 45430 | 17385281 ~ 17388799 (+) | False | AMCG00012387 |
| TU171517 | lncRNA | upstream | 45430 | 17385316 ~ 17388799 (+) | True | AMCG00012387 |
| TU171486 | lncRNA | upstream | 93493 | 17339578 ~ 17340736 (+) | True | G136458 |
| TU171617 | lncRNA | downstream | 12253 | 17488350 ~ 17488827 (+) | True | G136538 |
| TU171618 | lncRNA | downstream | 13222 | 17489319 ~ 17489544 (+) | True | G136539 |
| TU171659 | lncRNA | downstream | 147016 | 17623113 ~ 17635961 (+) | True | G136564 |
| TU171663 | lncRNA | downstream | 172531 | 17648628 ~ 17649107 (+) | True | G136568 |
| TU171665 | lncRNA | downstream | 173168 | 17649265 ~ 17653462 (+) | False | G136569 |
| AMCG00012387 | mRNA | upstream | 45557 | 17385560 ~ 17388672 (+) | False | AMCG00012387 |
| AMCG00012386 | mRNA | upstream | 54108 | 17374960 ~ 17380121 (+) | True | AMCG00012386 |
| AMCG00012388 | mRNA | upstream | 62676 | 17369263 ~ 17371553 (+) | True | AMCG00012388 |
| AMCG00012389 | mRNA | upstream | 144334 | 17269066 ~ 17289895 (+) | True | AMCG00012389 |
| AMCG00012377 | mRNA | upstream | 175630 | 17255412 ~ 17258599 (+) | True | AMCG00012377 |
| AMCG00012395 | mRNA | downstream | 21357 | 17497454 ~ 17504572 (+) | True | AMCG00012395 |
| AMCG00012401 | mRNA | downstream | 33275 | 17509372 ~ 17522821 (+) | True | AMCG00012401 |
| AMCG00012396 | mRNA | downstream | 53676 | 17529773 ~ 17537629 (+) | True | AMCG00012396 |
| AMCG00012397 | mRNA | downstream | 76489 | 17552586 ~ 17578771 (+) | True | AMCG00012397 |
| AMCG00012406 | mRNA | downstream | 105279 | 17581376 ~ 17598072 (+) | True | AMCG00012406 |
| TU171338 | other | upstream | 169825 | 17231376 ~ 17264404 (+) | False | G136341 |
| TU171333 | other | upstream | 199280 | 17231376 ~ 17234949 (+) | False | G136341 |
| TU171339 | other | upstream | 219346 | 17129774 ~ 17214883 (+) | False | G136341 |
| TU171331 | other | upstream | 299399 | 17129980 ~ 17134830 (+) | True | G136341 |
| TU171327 | other | upstream | 304890 | 17126013 ~ 17129339 (+) | True | AMCG00012374 |
| TU171630 | other | downstream | 41353 | 17517450 ~ 17518398 (+) | False | AMCG00012401 |
| TU171641 | other | downstream | 71271 | 17547368 ~ 17547968 (+) | True | G136558 |
| TU171661 | other | downstream | 169544 | 17645641 ~ 17646905 (+) | True | G136566 |
| TU171664 | other | downstream | 174670 | 17650767 ~ 17653462 (+) | True | G136569 |
| TU171766 | other | downstream | 279323 | 17755420 ~ 17757687 (+) | False | AMCG00012417 |
