RNA id: TU171807



Basic Information


Item Value
RNA id TU171807
length 413
RNA type TUCP
GC content 0.62
exon number 4
gene id G136666
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 17720726 ~ 17724068 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gcAGTGTCAGTCTGGGGGGGCTGGACCcagaggagatggagagggtAATGGGGCGGGGCGCCCCCTCCAGGGGAGGTCGGGACCCCCGCCGGAACCCCATCACACAGGAAATGGGTTCCCTGCTGTCCCTCACTGAGGAGGAGGTGGGCTCGGAGTGCGGGCACTTCCTGGGGCTGGAGGGACTGTCCAATCACCCGCAGGCATTCAACTTCCCGACGCTGAGCAAGTCCATCTCTCTCTGCGGCATTGACCGCGGCGATGACGTCTCACTGTATTCTCAAGACTGGGGATCCACACTGAGTGTGGATGCTGCCAGTGACAGGCTGTCTTCAGGTCGGGGGTCAGAGGGCAAAGGAGACAGTCCTCTGGGGAGAACCATCAGCTTCCTCAGAAAGATGGCTGGTAAATCCAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU171737 lncRNA downstream 36543 17682207 ~ 17684183 (-) True G136623
TU171729 lncRNA downstream 56556 17663455 ~ 17664170 (-) True G136616
TU171717 lncRNA downstream 76968 17643511 ~ 17643758 (-) True G136607
TU171713 lncRNA downstream 89898 17628887 ~ 17630828 (-) True G136605
TU171682 lncRNA downstream 99539 17620139 ~ 17621187 (-) True G136578
TU171905 lncRNA upstream 188170 17912238 ~ 17971853 (-) True G136746
TU171911 lncRNA upstream 217404 17941472 ~ 17963244 (-) True G136750
TU172002 lncRNA upstream 388608 18112676 ~ 18112903 (-) True G136820
TU172012 lncRNA upstream 416683 18140751 ~ 18179687 (-) True G136826
TU172125 lncRNA upstream 695941 18420009 ~ 18493905 (-) True G136915
AMCG00012415 mRNA downstream 23441 17691741 ~ 17697285 (-) True AMCG00012415
AMCG00012408 mRNA downstream 71700 17647172 ~ 17649026 (-) True AMCG00012408
AMCG00012409 mRNA downstream 84865 17634857 ~ 17635861 (-) True AMCG00012409
AMCG00012400 mRNA downstream 193192 17526875 ~ 17527534 (-) True AMCG00012400
AMCG00012398 mRNA downstream 197647 17519655 ~ 17523079 (-) True AMCG00012398
AMCG00012416 mRNA upstream 33266 17757334 ~ 17764561 (-) True AMCG00012416
AMCG00012414 mRNA upstream 43342 17767410 ~ 17779122 (-) True AMCG00012414
AMCG00012419 mRNA upstream 58419 17782487 ~ 17795215 (-) True AMCG00012419
AMCG00012421 mRNA upstream 104939 17829007 ~ 17842851 (-) True AMCG00012421
AMCG00012422 mRNA upstream 119140 17843208 ~ 17852603 (-) True AMCG00012422
TU171745 other downstream 32214 17686332 ~ 17688512 (-) True G136625
TU171623 other downstream 216740 17503618 ~ 17503986 (-) True G136544
TU171593 other downstream 286613 17416574 ~ 17434113 (-) True AMCG00012393
TU171572 other downstream 339131 17380180 ~ 17381595 (-) True AMCG00012391
TU171426 other downstream 477899 17233928 ~ 17242827 (-) True G136408
TU171825 other upstream 35911 17759979 ~ 17761454 (-) False AMCG00012416
TU171826 other upstream 43992 17768060 ~ 17770966 (-) False AMCG00012414
TU171956 other upstream 374112 18098180 ~ 18100627 (-) True AMCG00012437
TU172031 other upstream 481307 18205375 ~ 18237256 (-) True G136837
TU172106 other upstream 651262 18375330 ~ 18378297 (-) True G136900

Expression Profile