Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU172324 |
| length | 914 |
| RNA type | TUCP |
| GC content | 0.54 |
| exon number | 3 |
| gene id | G137083 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 19169748 ~ 19174421 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016137 | glycoside metabolic process | biological_process |
| GO:0016139 | glycoside catabolic process | biological_process |
| GO:1901658 | glycosyl compound catabolic process | biological_process |
| id | description |
|---|---|
| ko00603 | Glycosphingolipid biosynthesis - globo and isoglobo series |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU172318 | lncRNA | upstream | 8605 | 19139125 ~ 19161143 (+) | True | G137080 |
| TU172316 | lncRNA | upstream | 43435 | 19125841 ~ 19126313 (+) | True | G137079 |
| TU172311 | lncRNA | upstream | 54886 | 19112770 ~ 19114862 (+) | True | G137074 |
| TU172291 | lncRNA | upstream | 115919 | 19051944 ~ 19053829 (+) | False | AMCG00012471 |
| TU172255 | lncRNA | upstream | 143743 | 19020158 ~ 19026005 (+) | True | G137027 |
| TU172357 | lncRNA | downstream | 59989 | 19234410 ~ 19236788 (+) | True | G137110 |
| TU172358 | lncRNA | downstream | 59989 | 19234410 ~ 19235931 (+) | False | G137110 |
| TU172388 | lncRNA | downstream | 147585 | 19322006 ~ 19322259 (+) | True | G137130 |
| TU172394 | lncRNA | downstream | 157907 | 19332328 ~ 19349057 (+) | True | AMCG00012480 |
| TU172414 | lncRNA | downstream | 186923 | 19361344 ~ 19395753 (+) | True | G137144 |
| AMCG00012474 | mRNA | upstream | 60245 | 19100319 ~ 19109503 (+) | True | AMCG00012474 |
| AMCG00012470 | mRNA | upstream | 103835 | 19054640 ~ 19065913 (+) | True | AMCG00012470 |
| AMCG00012471 | mRNA | upstream | 116528 | 19047497 ~ 19053220 (+) | True | AMCG00012471 |
| AMCG00012465 | mRNA | upstream | 232270 | 18933584 ~ 18937478 (+) | True | AMCG00012465 |
| AMCG00012464 | mRNA | upstream | 244699 | 18915218 ~ 18925049 (+) | True | AMCG00012464 |
| AMCG00012476 | mRNA | downstream | 96889 | 19271310 ~ 19273160 (+) | True | AMCG00012476 |
| AMCG00012479 | mRNA | downstream | 103295 | 19277716 ~ 19294096 (+) | True | AMCG00012479 |
| AMCG00012481 | mRNA | downstream | 126392 | 19300813 ~ 19333427 (+) | True | AMCG00012481 |
| AMCG00012480 | mRNA | downstream | 160275 | 19334696 ~ 19350202 (+) | False | AMCG00012480 |
| AMCG00012483 | mRNA | downstream | 286870 | 19461291 ~ 19467495 (+) | True | AMCG00012483 |
| TU172158 | other | upstream | 625258 | 18539545 ~ 18544490 (+) | True | AMCG00012460 |
| TU172065 | other | upstream | 781442 | 18385289 ~ 18388306 (+) | True | G136864 |
| TU171980 | other | upstream | 1035367 | 18132407 ~ 18134381 (+) | True | AMCG00012439 |
| TU171871 | other | upstream | 1265938 | 17902832 ~ 17903810 (+) | True | G136720 |
| TU171793 | other | upstream | 1325827 | 17840933 ~ 17843921 (+) | True | G136658 |
| TU172360 | other | downstream | 63268 | 19237689 ~ 19238958 (+) | True | G137111 |
| TU172558 | other | downstream | 640504 | 19814925 ~ 19815617 (+) | True | G137252 |
| TU172571 | other | downstream | 716746 | 19891167 ~ 19895599 (+) | False | G137265 |
| TU172707 | other | downstream | 1156660 | 20331081 ~ 20341446 (+) | True | AMCG00012516 |
| TU172848 | other | downstream | 1256504 | 20430925 ~ 20440670 (+) | False | AMCG00012521 |
