RNA id: TU173230


Basic Information

Item Value
RNA id TU173230
length 235
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G137742
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 21687030 ~ 21687264 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cacactcacacacacacactcacacacacacacacacacacactcacacacacacacacacacacacactctctcacaaacacacactcacacacacactcacacacactctctcacacacacacactcacactcacacacacacacacacacactcacacacactctcacacacacacactctctcacacacacacacacacactcacacacacacacacacacacacactctc

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU173220 lncRNA downstream 29288 21650763 ~ 21657742 (-) True G137733
TU173193 lncRNA downstream 260785 21425171 ~ 21426245 (-) True G137709
TU173196 lncRNA downstream 322106 21364292 ~ 21364924 (-) True G137711
TU173183 lncRNA downstream 371792 21308218 ~ 21315238 (-) True G137701
TU173181 lncRNA downstream 380269 21303472 ~ 21306761 (-) True G137699
TU173331 lncRNA upstream 388421 22075685 ~ 22076815 (-) True G137828
TU173350 lncRNA upstream 440681 22127945 ~ 22128292 (-) True G137842
TU173355 lncRNA upstream 493567 22180831 ~ 22181039 (-) True G137847
TU173385 lncRNA upstream 621177 22308441 ~ 22326347 (-) True G137870
TU173460 lncRNA upstream 1036713 22723977 ~ 22724234 (-) True G137934
AMCG00012559 mRNA downstream 51604 21609574 ~ 21635426 (-) False AMCG00012559
AMCG00012556 mRNA downstream 189843 21494227 ~ 21497187 (-) False AMCG00012556
AMCG00012554 mRNA downstream 328228 21349445 ~ 21358802 (-) True AMCG00012554
AMCG00012551 mRNA downstream 396618 21283301 ~ 21290412 (-) True AMCG00012551
AMCG00012552 mRNA downstream 412622 21269740 ~ 21274408 (-) True AMCG00012552
AMCG00012561 mRNA upstream 12787 21700051 ~ 21703968 (-) True AMCG00012561
AMCG00012562 mRNA upstream 51692 21738956 ~ 21740372 (-) True AMCG00012562
AMCG00012563 mRNA upstream 340354 22027618 ~ 22039234 (-) True AMCG00012563
AMCG00012564 mRNA upstream 391477 22078741 ~ 22082729 (-) False AMCG00012564
AMCG00012566 mRNA upstream 417405 22104669 ~ 22120095 (-) False AMCG00012566
TU173202 other downstream 68260 21433664 ~ 21618770 (-) True AMCG00012559
TU173211 other downstream 184831 21496679 ~ 21502199 (-) True AMCG00012556
TU173044 other downstream 644587 21040089 ~ 21042443 (-) True AMCG00012541
TU173042 other downstream 648599 21035163 ~ 21038431 (-) True G137608
TU172771 other downstream 1416166 20261002 ~ 20270864 (-) True G137408
TU173345 other upstream 390909 22078173 ~ 22088469 (-) True AMCG00012564
TU173346 other upstream 390909 22078173 ~ 22088469 (-) False AMCG00012564
TU173344 other upstream 416389 22103653 ~ 22120556 (-) True AMCG00012566
TU173508 other upstream 1234619 22921883 ~ 23049378 (-) True G137974
TU173535 other upstream 1416203 23103467 ~ 23120688 (-) True G137996

Expression Profile