RNA id: TU173470


Basic Information

Item Value
RNA id TU173470
length 207
lncRNA type inter_gene
GC content 0.55
exon number 1
gene id G137944
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 22784737 ~ 22784943 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cagaaccagcattcacttcttcagcaatttgagctacagtagctcgtctgttggatcagaccacacgggccagccttcgctccccacgtgcatcaatgagccttggccgcccatgaccctgtcgccggttcactgcttttccttccttggaccacttttgataggtactgaccactgcagaccgggaacaccccacaagagctgtag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU173467 lncRNA downstream 13489 22770924 ~ 22771248 (-) True G137941
TU173460 lncRNA downstream 60503 22723977 ~ 22724234 (-) True G137934
TU173385 lncRNA downstream 458390 22308441 ~ 22326347 (-) True G137870
TU173355 lncRNA downstream 603698 22180831 ~ 22181039 (-) True G137847
TU173350 lncRNA downstream 656445 22127945 ~ 22128292 (-) True G137842
TU173515 lncRNA upstream 219067 23004010 ~ 23029222 (-) False G137981
TU173518 lncRNA upstream 219067 23004010 ~ 23029222 (-) False G137981
TU173519 lncRNA upstream 219067 23004010 ~ 23029222 (-) True G137981
TU173525 lncRNA upstream 281188 23066131 ~ 23066469 (-) True G137986
TU173551 lncRNA upstream 378159 23163102 ~ 23163391 (-) True G138011
AMCG00012575 mRNA downstream 7053 22719338 ~ 22777684 (-) True AMCG00012575
AMCG00012573 mRNA downstream 144541 22631943 ~ 22640196 (-) True AMCG00012573
AMCG00012574 mRNA downstream 176581 22602178 ~ 22608156 (-) True AMCG00012574
AMCG00012572 mRNA downstream 183569 22588140 ~ 22601168 (-) True AMCG00012572
AMCG00012565 mRNA downstream 618999 22152419 ~ 22165738 (-) True AMCG00012565
AMCG00012582 mRNA upstream 96516 22881459 ~ 23005234 (-) True AMCG00012582
AMCG00012584 mRNA upstream 396261 23181204 ~ 23185663 (-) True AMCG00012584
AMCG00012587 mRNA upstream 472340 23257283 ~ 23488884 (-) True AMCG00012587
AMCG00012590 mRNA upstream 748652 23533595 ~ 23598058 (-) True AMCG00012590
AMCG00012594 mRNA upstream 988534 23773477 ~ 23776880 (-) True AMCG00012594
TU173344 other downstream 664181 22103653 ~ 22120556 (-) True AMCG00012566
TU173345 other downstream 696268 22078173 ~ 22088469 (-) True AMCG00012564
TU173346 other downstream 696268 22078173 ~ 22088469 (-) False AMCG00012564
TU173202 other downstream 1165967 21433664 ~ 21618770 (-) True AMCG00012559
TU173508 other upstream 136940 22921883 ~ 23049378 (-) True G137974
TU173535 other upstream 318524 23103467 ~ 23120688 (-) True G137996
TU173691 other upstream 988560 23773503 ~ 23773998 (-) False AMCG00012594
TU173837 other upstream 1449561 24234504 ~ 24234867 (-) True G138207

Expression Profile