RNA id: TU173551


Basic Information

Item Value
RNA id TU173551
length 290
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G138011
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 23163102 ~ 23163391 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

aaatctgtagtaagagtaataagttaagggagtcacgctgtgccgtttaaaatacatatatactagcacaaatgatgacgataataataacaatacatatttgctatttagtattattgttgcacatggaaatgtatttttatgtgaacatgcttgtctgaatataatgatgtctacacgtttagctcttcctaatatctttaacagaaacatgtatttattacgctgtttaaaatcatgtaaagcacaaataataaaacagacacaaagtcctGTCCACTCAGGCTGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU173525 lncRNA downstream 96633 23066131 ~ 23066469 (-) True G137986
TU173515 lncRNA downstream 133880 23004010 ~ 23029222 (-) False G137981
TU173518 lncRNA downstream 133880 23004010 ~ 23029222 (-) False G137981
TU173519 lncRNA downstream 133880 23004010 ~ 23029222 (-) True G137981
TU173470 lncRNA downstream 378159 22784737 ~ 22784943 (-) True G137944
TU173682 lncRNA upstream 533364 23696755 ~ 23764819 (-) True G138085
TU173723 lncRNA upstream 732649 23896040 ~ 23935478 (-) True G138120
TU173754 lncRNA upstream 839887 24003278 ~ 24085235 (-) True G138142
TU173792 lncRNA upstream 936778 24100169 ~ 24139567 (-) True G138176
TU173795 lncRNA upstream 950813 24114204 ~ 24114849 (-) True G138178
AMCG00012582 mRNA downstream 157868 22881459 ~ 23005234 (-) True AMCG00012582
AMCG00012575 mRNA downstream 385418 22719338 ~ 22777684 (-) True AMCG00012575
AMCG00012573 mRNA downstream 522906 22631943 ~ 22640196 (-) True AMCG00012573
AMCG00012574 mRNA downstream 554946 22602178 ~ 22608156 (-) True AMCG00012574
AMCG00012572 mRNA downstream 561934 22588140 ~ 22601168 (-) True AMCG00012572
AMCG00012584 mRNA upstream 17813 23181204 ~ 23185663 (-) True AMCG00012584
AMCG00012587 mRNA upstream 93892 23257283 ~ 23488884 (-) True AMCG00012587
AMCG00012590 mRNA upstream 370204 23533595 ~ 23598058 (-) True AMCG00012590
AMCG00012594 mRNA upstream 610086 23773477 ~ 23776880 (-) True AMCG00012594
AMCG00012597 mRNA upstream 789741 23953132 ~ 23976623 (-) True AMCG00012597
TU173535 other downstream 42414 23103467 ~ 23120688 (-) True G137996
TU173508 other downstream 113724 22921883 ~ 23049378 (-) True G137974
TU173344 other downstream 1042546 22103653 ~ 22120556 (-) True AMCG00012566
TU173345 other downstream 1074633 22078173 ~ 22088469 (-) True AMCG00012564
TU173346 other downstream 1074633 22078173 ~ 22088469 (-) False AMCG00012564
TU173691 other upstream 610112 23773503 ~ 23773998 (-) False AMCG00012594
TU173837 other upstream 1071113 24234504 ~ 24234867 (-) True G138207

Expression Profile