RNA id: TU173837


Basic Information

Item Value
RNA id TU173837
length 364
RNA type TUCP
GC content 0.57
exon number 1
gene id G138207
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 24234504 ~ 24234867 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCTCCCAACAGTCCAGGTGGACAGGGCCCTACAAGGTGCTCCTGACCACCCACACAGCTGTGAAGTGCCAAGGAAAGACGACATGGATCCACTCCTCCCACTGCAAACTTGCCAATTGAGGCGATCAGCACAACCCTGGTGGAGAACAGAGGGATGCTCGCCTTCACCTGTATCCTCTTCCTGATCGCCTGCGGGACCATCGTATGTGCCATAGTAATCTGGGAAGAGGGCGCCTTCAACTCCAAGCGGACGGGATCATCACTGACTGGGGAAACCAGTCTAGAAGAAGCTGACATCGGCATCACCCTGCAGCTAACAGCACAGGGCCAGAGCAGTGGCCCAAAAGGAGCAACAGGACCCACGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU173792 lncRNA downstream 94937 24100169 ~ 24139567 (-) True G138176
TU173795 lncRNA downstream 119655 24114204 ~ 24114849 (-) True G138178
TU173754 lncRNA downstream 149269 24003278 ~ 24085235 (-) True G138142
TU173723 lncRNA downstream 299026 23896040 ~ 23935478 (-) True G138120
TU173682 lncRNA downstream 469685 23696755 ~ 23764819 (-) True G138085
TU173840 lncRNA upstream 1795 24236662 ~ 24236924 (-) True G138210
TU173841 lncRNA upstream 5901 24240768 ~ 24240976 (-) True G138211
AMCG00012597 mRNA downstream 257881 23953132 ~ 23976623 (-) True AMCG00012597
AMCG00012594 mRNA downstream 457624 23773477 ~ 23776880 (-) True AMCG00012594
AMCG00012590 mRNA downstream 636446 23533595 ~ 23598058 (-) True AMCG00012590
AMCG00012587 mRNA downstream 745620 23257283 ~ 23488884 (-) True AMCG00012587
AMCG00012584 mRNA downstream 1048841 23181204 ~ 23185663 (-) True AMCG00012584
TU173691 other downstream 460506 23773503 ~ 23773998 (-) False AMCG00012594
TU173535 other downstream 1113816 23103467 ~ 23120688 (-) True G137996
TU173508 other downstream 1185126 22921883 ~ 23049378 (-) True G137974
TU173344 other downstream 2113948 22103653 ~ 22120556 (-) True AMCG00012566
TU173345 other downstream 2146035 22078173 ~ 22088469 (-) True AMCG00012564

Expression Profile