RNA id: TU173839


Basic Information

Item Value
RNA id TU173839
length 316
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G138209
representative True

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 24236662 ~ 24236977 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTATCAGATATTGAACAATTAATTAGcgctccttttttttttttttttctttctaatagTAGGTCAAACCTACGCTGCAGTTTACAGACACACTTTTTTCTGCAGGAAcccaaacaggaaaacacagtcCTGTTTCTTCACAAACAAGAAGACACAGTCAAGTTCGTGGCAACCCAGGTTAAATAGGAAGACACAGTCCTATTTCTTCATAAACAAGAAGACACAGTCAAGTCTATGGTAACTCTAAGAAACCCTTGTTTCTTTACAagcaagaaaacatttcctgcCTCAAGTACTTGATGTAAGGCAAGCAACa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU173721 lncRNA upstream 314793 23920076 ~ 23921869 (+) True G138118
TU173588 lncRNA upstream 393451 23798606 ~ 23843211 (+) False G138042
TU173842 lncRNA downstream 4162 24241139 ~ 24241424 (+) True G138212
AMCG00012598 mRNA upstream 14312 24216367 ~ 24222350 (+) True AMCG00012598
AMCG00012599 mRNA upstream 167211 24043955 ~ 24069451 (+) True AMCG00012599
AMCG00012596 mRNA upstream 260093 23952192 ~ 23976569 (+) True AMCG00012596
AMCG00012595 mRNA upstream 337325 23859829 ~ 23899337 (+) True AMCG00012595
AMCG00012593 mRNA upstream 526592 23697424 ~ 23710070 (+) True AMCG00012593
TU173653 other upstream 494071 23709518 ~ 23742591 (+) False AMCG00012593
TU173480 other upstream 1348606 22887538 ~ 22888056 (+) False AMCG00012579
TU173473 other upstream 1418204 22817953 ~ 22818458 (+) True G137947
TU173418 other upstream 1670556 22565424 ~ 22566106 (+) True G137899
TU173274 other upstream 2278504 21932295 ~ 21958158 (+) True G137775

Expression Profile