RNA id: AMCG00012626


Basic Information

Item Value
RNA id AMCG00012626
length 1422
RNA type mRNA
GC content 0.53
exon number 7
gene id AMCG00012626
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 152662 ~ 195601 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTGGGCActggctaaaaataaaaatccattccTGGATTCCGAGTTTGTAAAGGAGTGCATGTTAGAATTGCTGGACGAGCTGTTGGCCggagacaaaaacaaagatgacaTTCTCAACCTCGTCAAGCTGATTCTACAGCGACACGAAGAGTGGAAGATTGCCTaaGAGATTCTCTGTCAGCGTGAAGCTCCAGCCGACGAGGAGCTCCCAGAAGGGCACATCCCAGAGCAGTTTGCTGGCCTTCTTCACGGCTCTTCCCCTGCTTGCGAGTCTCCGGAGAACCCCTACCAGTTGTATAGTAAAGTGAGGAAATATAGCGGCCCGGAGCCCGGCAGCAGCCACAACACCAACCTCCTGCACACGACAGACTGCAATGCGCACTTGCTACGAACTAGCAGTGATGCATCTGCGCTGAAGAGCACCAAAGAAACCAAACCCCAAGTTGTGTACAGGACTATTTTTCACACAAAAGTCAACCAGGCTGACCCCGGCAACTTCCTGAGCACCAGGAATGTGAGGAACGGGGAGCAGTGGGCAAGTGGCACAGCCGGAGGTTTCGAGGACCGCGCTTGCACTTTAGGGAGGATGCGTTCCATCCCCAAGAATGTCCTGGACCTACAGCTCTGCAGGAACATCTCCAAGTCTGACTCCAACCTCATCTCCTGCTCGCCCATCGAGGAGGAGTACAGGTCCAGCCGCTGCGAGCCGGTCCTGAGTAGCAAACCCAAGCCAGGGAAACGCTTGGAGAGGACACCGTCTTTCACCGCAGAATGGGAAGAGCTGGCGGGCTCTTTCGACAGTCACTTTGCCCGGAATATGATGTGGCAGTGCCAACTGTCGCAACCGGACTGCCGCTGCTACCGTGTCGACGGCTACTCTTTGCTCAAAAGACTCCCTCTTCATCCTCTCATAGGACCCCGGTGTCCCGTACAGTCGGTGGGACAGTGGTTGGATAGCATTGGGCTCGTACAGTATGAGAACCACCTGCTGGCTAATGGATTTGACAATGTGCAGTTCATGGGAAGTAACGTAGTGGAAGACCAGGATCTCTTGGAGATTGGGATCCTAAACTCGGCTCACAGACAGCGGCTTCTGCAGGCGATTCGGCTCCTTCCCAGGGTGAGACCAATAGGCTATGATGGAAACAACCCAACGTCGGTGGCAGAATGGTTGGAGTCCTTGGAGCTGGGGGACTACACTAAGTCCTTCCTGATCAATGGTTACACATCCATGGACCTTGTGAAAAAGATCTGGGAAATCGAGCTGATCAACACACCGCTGCACCGGCCGCTCCTGGGAGCTCTGCTGGCTTTCATGAGGATGAATTTAGGGGGCTTGATCAAGAAGTCATTTTCAGACAAGGGCAGCTCTCCTGATCTTTGTGCTGATGTGATGAGTGTTCTGTTAAAGATGAAGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU47758 lncRNA upstream 328146 523747 ~ 539591 (-) False AMCG00012628
TU47775 lncRNA upstream 401007 596608 ~ 596818 (-) True G38305
TU47832 lncRNA upstream 641510 837111 ~ 840487 (-) True G38355
TU47918 lncRNA upstream 1383354 1578955 ~ 1583433 (-) False AMCG00012646
TU47965 lncRNA upstream 1689028 1884629 ~ 1887591 (-) True G38472
AMCG00012625 mRNA downstream 4557 124039 ~ 148105 (-) True AMCG00012625
AMCG00012621 mRNA downstream 137253 8500 ~ 15409 (-) True AMCG00012621
AMCG00012623 mRNA upstream 85993 281594 ~ 298125 (-) True AMCG00012623
AMCG00012624 mRNA upstream 224632 420233 ~ 450576 (-) True AMCG00012624
AMCG00012628 mRNA upstream 318621 514222 ~ 538806 (-) False AMCG00012628
AMCG00012632 mRNA upstream 362228 557829 ~ 574372 (-) True AMCG00012632
AMCG00012631 mRNA upstream 393626 589227 ~ 590653 (-) True AMCG00012631
TU47757 other upstream 328146 523747 ~ 539591 (-) True AMCG00012628
TU47949 other upstream 1581253 1776854 ~ 1777221 (-) True G38458
TU47984 other upstream 1988284 2183885 ~ 2184163 (-) True G38490
TU49217 other upstream 6260120 6455721 ~ 6456178 (-) True G39487
TU49940 other upstream 8916840 9112441 ~ 9113076 (-) False AMCG00012829

Expression Profile