RNA id: AMCG00012648



Basic Information


Item Value
RNA id AMCG00012648
length 189
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00012648
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 2319527 ~ 2345217 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAAGGTCAGCAGAGCCAAGACCAGGGCCAAGATCCAGATGATTCAGCATGCAGTGAGCCAGGCCATGGCCTCCTTCCTTTTCAACGATACGATTCTGGAGCTGGACCACAGCTGCTGTGTCTTCATCACAATGAACACAGGCTATGCTGGCTGCTGCCAACTGCCGGACAACCTCAAGataaaataa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU47995 lncRNA downstream 24363 2294960 ~ 2295164 (-) True G38501
TU47972 lncRNA downstream 287316 2031837 ~ 2032211 (-) True G38478
TU47969 lncRNA downstream 324464 1994847 ~ 1995063 (-) True G38475
TU47966 lncRNA downstream 417603 1900760 ~ 1901924 (-) True G38473
TU47965 lncRNA downstream 431936 1884629 ~ 1887591 (-) True G38472
TU48044 lncRNA upstream 153706 2498923 ~ 2500343 (-) True G38533
TU48051 lncRNA upstream 219088 2564305 ~ 2564702 (-) True G38539
TU48062 lncRNA upstream 260281 2605498 ~ 2605768 (-) True G38549
TU48065 lncRNA upstream 277772 2622989 ~ 2623189 (-) True G38552
TU48086 lncRNA upstream 380812 2726029 ~ 2775202 (-) True G38573
AMCG00012649 mRNA downstream 2408 2316002 ~ 2317119 (-) True AMCG00012649
AMCG00012646 mRNA downstream 502327 1583313 ~ 1817200 (-) True AMCG00012646
AMCG00012642 mRNA downstream 737257 1360323 ~ 1582270 (-) True AMCG00012642
AMCG00012643 mRNA downstream 973609 1038769 ~ 1345918 (-) True AMCG00012643
AMCG00012640 mRNA downstream 1282174 1013482 ~ 1037353 (-) True AMCG00012640
AMCG00012655 mRNA upstream 76391 2421608 ~ 2431840 (-) True AMCG00012655
AMCG00012656 mRNA upstream 91633 2436850 ~ 2468497 (-) True AMCG00012656
AMCG00012663 mRNA upstream 532551 2877768 ~ 2910246 (-) True AMCG00012663
AMCG00012664 mRNA upstream 576484 2921701 ~ 2962489 (-) True AMCG00012664
AMCG00012665 mRNA upstream 742219 3087436 ~ 3100475 (-) True AMCG00012665
TU47984 other downstream 135364 2183885 ~ 2184163 (-) True G38490
TU47949 other downstream 542306 1776854 ~ 1777221 (-) True G38458
TU47757 other downstream 1779936 523747 ~ 539591 (-) True AMCG00012628
TU49217 other upstream 4110504 6455721 ~ 6456178 (-) True G39487
TU49940 other upstream 6767224 9112441 ~ 9113076 (-) False AMCG00012829
TU50581 other upstream 9895179 12240396 ~ 12253443 (-) True AMCG00012888
TU50830 other upstream 10769676 13114893 ~ 13115487 (-) True G40778
TU52042 other upstream 15535008 17880225 ~ 17899426 (-) False AMCG00013038

Expression Profile