RNA id: AMCG00012649



Basic Information


Item Value
RNA id AMCG00012649
length 228
RNA type mRNA
GC content 0.49
exon number 2
gene id AMCG00012649
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 2316002 ~ 2317119 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACAGTACCAGACTACGTCCTGATTGCCGAGATATCTCTCTACGCCATGGGCTTTGTGCACACCCGTTACCTGGCCAACAAGATTGTGGCCACTTACAGACTGGGCTCCGAACAGGTGTCCAGCTATGATAATAAGTGCAGGCGAGGAGCAGAAAGTAAACTAATGTTCTCAGCCGTGGTGATCTCAACAGCTTTCTTCCTCTTCACAATCATCACGCCAAGTTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU47995 lncRNA downstream 20838 2294960 ~ 2295164 (-) True G38501
TU47972 lncRNA downstream 283791 2031837 ~ 2032211 (-) True G38478
TU47969 lncRNA downstream 320939 1994847 ~ 1995063 (-) True G38475
TU47966 lncRNA downstream 414078 1900760 ~ 1901924 (-) True G38473
TU47965 lncRNA downstream 428411 1884629 ~ 1887591 (-) True G38472
TU48044 lncRNA upstream 181804 2498923 ~ 2500343 (-) True G38533
TU48051 lncRNA upstream 247186 2564305 ~ 2564702 (-) True G38539
TU48062 lncRNA upstream 288379 2605498 ~ 2605768 (-) True G38549
TU48065 lncRNA upstream 305870 2622989 ~ 2623189 (-) True G38552
TU48086 lncRNA upstream 408910 2726029 ~ 2775202 (-) True G38573
AMCG00012646 mRNA downstream 498802 1583313 ~ 1817200 (-) True AMCG00012646
AMCG00012642 mRNA downstream 733732 1360323 ~ 1582270 (-) True AMCG00012642
AMCG00012643 mRNA downstream 970084 1038769 ~ 1345918 (-) True AMCG00012643
AMCG00012640 mRNA downstream 1278649 1013482 ~ 1037353 (-) True AMCG00012640
AMCG00012635 mRNA downstream 1395877 914435 ~ 920125 (-) True AMCG00012635
AMCG00012648 mRNA upstream 2408 2319527 ~ 2345217 (-) True AMCG00012648
AMCG00012655 mRNA upstream 104489 2421608 ~ 2431840 (-) True AMCG00012655
AMCG00012656 mRNA upstream 119731 2436850 ~ 2468497 (-) True AMCG00012656
AMCG00012663 mRNA upstream 560649 2877768 ~ 2910246 (-) True AMCG00012663
AMCG00012664 mRNA upstream 604582 2921701 ~ 2962489 (-) True AMCG00012664
TU47984 other downstream 131839 2183885 ~ 2184163 (-) True G38490
TU47949 other downstream 538781 1776854 ~ 1777221 (-) True G38458
TU47757 other downstream 1776411 523747 ~ 539591 (-) True AMCG00012628
TU49217 other upstream 4138602 6455721 ~ 6456178 (-) True G39487
TU49940 other upstream 6795322 9112441 ~ 9113076 (-) False AMCG00012829
TU50581 other upstream 9923277 12240396 ~ 12253443 (-) True AMCG00012888
TU50830 other upstream 10797774 13114893 ~ 13115487 (-) True G40778
TU52042 other upstream 15563106 17880225 ~ 17899426 (-) False AMCG00013038

Expression Profile