RNA id: AMCG00012651



Basic Information


Item Value
RNA id AMCG00012651
length 447
RNA type mRNA
GC content 0.48
exon number 4
gene id AMCG00012651
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 2397489 ~ 2404357 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TTCGGAGGCTGCGCAACAAGATGTGAACTGTGAACCAGCATTAGGACATTTCATTGGACAAGAGCTCTGCCTGCGTCGTGATTGGTTAATTTAAAAGTTGGCTGATTAACATACGAGGAACACAGGGAGCGCGAAAGCGGCCGGGAGCAACGGAGAACCACGGGGCCTCGCAAAAGAAGcgggaaatttaaaaaaaagatgccCAAAAGAGCACGCATCCCAACGAAGATGAGATTTTATGAACCAGACCCCAGCTCACCCAAAGATGACCAGGATGCCTACATCATGCGCTGTGGCACACTGGATGGATGGACACCACTTGAGAAAACTAAGGATGACTCTGtggaaagaaggagagaggttGCTATCCGTGGCTTAGTGGTGTATCTCAGAGAAAAGATGGAGGATCTCTTCAAAGAGCAGTTGGTATGTAAATCAGACACTTAA

Function


GO: NA

KEGG:

id description
ko04110 Cell cycle

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU47997 lncRNA upstream 100310 2296692 ~ 2297179 (+) True G38503
TU47983 lncRNA upstream 213351 2183891 ~ 2184138 (+) True G38489
TU47978 lncRNA upstream 297099 2100124 ~ 2100390 (+) True G38484
TU47968 lncRNA upstream 402404 1994844 ~ 1995085 (+) True G38474
TU47948 lncRNA upstream 620239 1776848 ~ 1777250 (+) True G38457
TU48000 lncRNA downstream 10164 2414521 ~ 2431408 (+) True G38505
TU48026 lncRNA downstream 33740 2438097 ~ 2440033 (+) True G38526
TU48030 lncRNA downstream 45426 2449783 ~ 2468853 (+) True G38530
TU48033 lncRNA downstream 52400 2456757 ~ 2532789 (+) True G38531
TU48064 lncRNA downstream 212565 2616922 ~ 2617197 (+) True G38551
AMCG00012652 mRNA upstream 5785 2361338 ~ 2391704 (+) True AMCG00012652
AMCG00012654 mRNA upstream 36564 2359186 ~ 2360925 (+) True AMCG00012654
AMCG00012653 mRNA upstream 38342 2333875 ~ 2359147 (+) True AMCG00012653
AMCG00012650 mRNA upstream 102241 2265573 ~ 2295248 (+) True AMCG00012650
AMCG00012647 mRNA upstream 495816 1900768 ~ 1901673 (+) True AMCG00012647
AMCG00012657 mRNA downstream 95701 2500058 ~ 2540181 (+) True AMCG00012657
AMCG00012658 mRNA downstream 407641 2811998 ~ 2851213 (+) True AMCG00012658
AMCG00012659 mRNA downstream 773041 3177398 ~ 3181902 (+) True AMCG00012659
AMCG00012660 mRNA downstream 779823 3184180 ~ 3184551 (+) True AMCG00012660
AMCG00012661 mRNA downstream 781653 3186010 ~ 3186423 (+) True AMCG00012661
TU47823 other upstream 1572781 820524 ~ 824708 (+) False AMCG00012639
TU48550 other downstream 1965956 4370313 ~ 4373574 (+) True G38954
TU48986 other downstream 3148060 5552417 ~ 5552767 (+) True G39297
TU49057 other downstream 3403489 5807846 ~ 5823320 (+) False AMCG00012718
TU49223 other downstream 4113051 6517408 ~ 6517921 (+) False AMCG00012748
TU49477 other downstream 5321131 7725488 ~ 7727828 (+) True G39670

Expression Profile