RNA id: AMCG00012676


Basic Information

Item Value
RNA id AMCG00012676
length 471
RNA type mRNA
GC content 0.59
exon number 4
gene id AMCG00012676
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 3862048 ~ 3863424 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTGCCAGAGCAATCGCACAGTTCATCACCAtacagtgcagcacagacagGAGAGCTGCAATCTGACATCACCTCTCTCTTccattctctccctctgtccagGCCTGAACCCCAGCAGAAAGCCCTATCGGTgacctccccacccccacccccacccccgcccccgccACTCCTCCCTGAGCCAGCTGCCCCCCCTGAGCCGGAAGAGGAGATCCTGGGCTCTGACGACGAGGAGCAGGAGGACCCCGCTGACTACTGCAAAGGAGGGTACCACCCAGTGAAGATCGGGGACCTGTTTAATGGGAGGTTTCATGTGATCCGTAAGCTGGGCTGGGGACACTTCTCCACTGTGTGGCTGTGCTGGGACATCCAGGGGAAGCGGTTCGTGGCGATGAAGGTGGTGAAGAGTGCGCAGCACTACACTGAAACGGCACTGGATGAGATCAGGCTGCTTAGATGTACATTTTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU48414 lncRNA downstream 77998 3783804 ~ 3784050 (-) True G38842
TU48413 lncRNA downstream 78657 3783160 ~ 3783391 (-) True G38841
TU48345 lncRNA downstream 223182 3554385 ~ 3638866 (-) True G38791
TU48349 lncRNA downstream 300198 3506837 ~ 3561850 (-) True G38792
TU48287 lncRNA downstream 430712 3429936 ~ 3431336 (-) True G38743
TU48496 lncRNA upstream 110929 3974353 ~ 3976596 (-) True G38909
TU48498 lncRNA upstream 174015 4037439 ~ 4096741 (-) True G38910
TU48565 lncRNA upstream 263583 4127007 ~ 4517632 (-) True G38965
TU48618 lncRNA upstream 463659 4327083 ~ 4329635 (-) True G39017
TU48782 lncRNA upstream 922270 4785694 ~ 4786528 (-) True G39160
AMCG00012673 mRNA downstream 89061 3757095 ~ 3772987 (-) True AMCG00012673
AMCG00012671 mRNA downstream 107053 3738744 ~ 3754995 (-) True AMCG00012671
AMCG00012672 mRNA downstream 132402 3727446 ~ 3729646 (-) True AMCG00012672
AMCG00012674 mRNA downstream 140648 3678679 ~ 3721400 (-) True AMCG00012674
AMCG00012670 mRNA downstream 198835 3652207 ~ 3663213 (-) True AMCG00012670
AMCG00012677 mRNA upstream 117366 3980790 ~ 3990090 (-) True AMCG00012677
AMCG00012678 mRNA upstream 151748 4015172 ~ 4024403 (-) True AMCG00012678
AMCG00012682 mRNA upstream 440571 4303995 ~ 4308720 (-) True AMCG00012682
AMCG00012683 mRNA upstream 485683 4349107 ~ 4367364 (-) True AMCG00012683
AMCG00012684 mRNA upstream 516449 4379873 ~ 4381284 (-) True AMCG00012684
TU47984 other downstream 1677885 2183885 ~ 2184163 (-) True G38490
TU47949 other downstream 2084827 1776854 ~ 1777221 (-) True G38458
TU47757 other downstream 3322457 523747 ~ 539591 (-) True AMCG00012628
TU49217 other upstream 2592297 6455721 ~ 6456178 (-) True G39487
TU49940 other upstream 5249017 9112441 ~ 9113076 (-) False AMCG00012829
TU50581 other upstream 8376972 12240396 ~ 12253443 (-) True AMCG00012888
TU50830 other upstream 9251469 13114893 ~ 13115487 (-) True G40778
TU52042 other upstream 14016801 17880225 ~ 17899426 (-) False AMCG00013038

Expression Profile