RNA id: AMCG00012677



Basic Information


Item Value
RNA id AMCG00012677
length 219
RNA type mRNA
GC content 0.46
exon number 2
gene id AMCG00012677
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 3980790 ~ 3990090 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAGAGGCGGCGGAGAGATAAAATCAATAACTGGATCGTCACATTGTCTAAGATCATTCCAGACTGCAACACGGACAACAGCAAGACAGGAGCAAGTAAAGGTGGGATCCTGTCGAAGGCCTGTGACTATATTCGTGAATTGCGACAGAACAACCAGCGTTTGCAAGAAAGCTTCAAAGAGGTGGAGAGAGTACAGGTGGACAATGAGCTATTAAGACAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU48496 lncRNA downstream 4194 3974353 ~ 3976596 (-) True G38909
TU48414 lncRNA downstream 196740 3783804 ~ 3784050 (-) True G38842
TU48413 lncRNA downstream 197399 3783160 ~ 3783391 (-) True G38841
TU48345 lncRNA downstream 341924 3554385 ~ 3638866 (-) True G38791
TU48349 lncRNA downstream 418940 3506837 ~ 3561850 (-) True G38792
TU48498 lncRNA upstream 47349 4037439 ~ 4096741 (-) True G38910
TU48565 lncRNA upstream 136917 4127007 ~ 4517632 (-) True G38965
TU48618 lncRNA upstream 336993 4327083 ~ 4329635 (-) True G39017
TU48782 lncRNA upstream 795604 4785694 ~ 4786528 (-) True G39160
TU48808 lncRNA upstream 923913 4914003 ~ 4916594 (-) True G39174
AMCG00012676 mRNA downstream 117366 3862048 ~ 3863424 (-) True AMCG00012676
AMCG00012673 mRNA downstream 207803 3757095 ~ 3772987 (-) True AMCG00012673
AMCG00012671 mRNA downstream 225795 3738744 ~ 3754995 (-) True AMCG00012671
AMCG00012672 mRNA downstream 251144 3727446 ~ 3729646 (-) True AMCG00012672
AMCG00012674 mRNA downstream 259390 3678679 ~ 3721400 (-) True AMCG00012674
AMCG00012678 mRNA upstream 25082 4015172 ~ 4024403 (-) True AMCG00012678
AMCG00012682 mRNA upstream 313905 4303995 ~ 4308720 (-) True AMCG00012682
AMCG00012683 mRNA upstream 359017 4349107 ~ 4367364 (-) True AMCG00012683
AMCG00012684 mRNA upstream 389783 4379873 ~ 4381284 (-) True AMCG00012684
AMCG00012688 mRNA upstream 517537 4507627 ~ 4508220 (-) True AMCG00012688
TU47984 other downstream 1796627 2183885 ~ 2184163 (-) True G38490
TU47949 other downstream 2203569 1776854 ~ 1777221 (-) True G38458
TU47757 other downstream 3441199 523747 ~ 539591 (-) True AMCG00012628
TU49217 other upstream 2465631 6455721 ~ 6456178 (-) True G39487
TU49940 other upstream 5122351 9112441 ~ 9113076 (-) False AMCG00012829
TU50581 other upstream 8250306 12240396 ~ 12253443 (-) True AMCG00012888
TU50830 other upstream 9124803 13114893 ~ 13115487 (-) True G40778
TU52042 other upstream 13890135 17880225 ~ 17899426 (-) False AMCG00013038

Expression Profile