RNA id: AMCG00012678


Basic Information

Item Value
RNA id AMCG00012678
length 246
RNA type mRNA
GC content 0.56
exon number 2
gene id AMCG00012678
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 4015172 ~ 4024403 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCGGTGATACAGAACCCCTTCAGCAATGGTGGTAGTCCAGCCACAGACACAGTCAGCGGAGAGACACGTTTTGCCTACTTCCCTGCGTCCACTGTGGGTGACGGCACGGCTACAACGTTATCGGTGCAGGCCGCCGACCCCACCCTTGCACAGGCTGGCGGTCAATTTTATGTGATGATGACTCCCCCAGATGTTCTGCAGTCAGGAACACCCAGAACAATTGCACCAAGGACACATCCGTACTCA

Function

GO:

id name namespace
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU48496 lncRNA downstream 38576 3974353 ~ 3976596 (-) True G38909
TU48414 lncRNA downstream 231122 3783804 ~ 3784050 (-) True G38842
TU48413 lncRNA downstream 231781 3783160 ~ 3783391 (-) True G38841
TU48345 lncRNA downstream 376306 3554385 ~ 3638866 (-) True G38791
TU48349 lncRNA downstream 453322 3506837 ~ 3561850 (-) True G38792
TU48498 lncRNA upstream 13036 4037439 ~ 4096741 (-) True G38910
TU48565 lncRNA upstream 102604 4127007 ~ 4517632 (-) True G38965
TU48618 lncRNA upstream 302680 4327083 ~ 4329635 (-) True G39017
TU48782 lncRNA upstream 761291 4785694 ~ 4786528 (-) True G39160
TU48808 lncRNA upstream 889600 4914003 ~ 4916594 (-) True G39174
AMCG00012677 mRNA downstream 25082 3980790 ~ 3990090 (-) True AMCG00012677
AMCG00012676 mRNA downstream 151748 3862048 ~ 3863424 (-) True AMCG00012676
AMCG00012673 mRNA downstream 242185 3757095 ~ 3772987 (-) True AMCG00012673
AMCG00012671 mRNA downstream 260177 3738744 ~ 3754995 (-) True AMCG00012671
AMCG00012672 mRNA downstream 285526 3727446 ~ 3729646 (-) True AMCG00012672
AMCG00012682 mRNA upstream 279592 4303995 ~ 4308720 (-) True AMCG00012682
AMCG00012683 mRNA upstream 324704 4349107 ~ 4367364 (-) True AMCG00012683
AMCG00012684 mRNA upstream 355470 4379873 ~ 4381284 (-) True AMCG00012684
AMCG00012688 mRNA upstream 483224 4507627 ~ 4508220 (-) True AMCG00012688
AMCG00012690 mRNA upstream 599512 4623915 ~ 4642672 (-) True AMCG00012690
TU47984 other downstream 1831009 2183885 ~ 2184163 (-) True G38490
TU47949 other downstream 2237951 1776854 ~ 1777221 (-) True G38458
TU47757 other downstream 3475581 523747 ~ 539591 (-) True AMCG00012628
TU49217 other upstream 2431318 6455721 ~ 6456178 (-) True G39487
TU49940 other upstream 5088038 9112441 ~ 9113076 (-) False AMCG00012829
TU50581 other upstream 8215993 12240396 ~ 12253443 (-) True AMCG00012888
TU50830 other upstream 9090490 13114893 ~ 13115487 (-) True G40778
TU52042 other upstream 13855822 17880225 ~ 17899426 (-) False AMCG00013038

Expression Profile