RNA id: AMCG00012704


Basic Information

Item Value
RNA id AMCG00012704
length 492
RNA type mRNA
GC content 0.50
exon number 3
gene id AMCG00012704
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 4996564 ~ 5005697 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATAAGTTCATCTATTAATGGGGCTGAAAAACCTTTACGAAACCACGACAGACGAAGTGTGCCGAGCCATCTCCCTGCAGAACATCTGTCTGTGGCCCAGCACTCCTCCCTACCTCCGGTCAGGAAGTCAGTAAACATGGAAGAGTCCTCCTCCGGGTCCCCCGACTCTGCAGCAACTGATGGGAAAACACATCACCCAGCCATTAAGGATGTCAATATTTTCTTTGACGAGTCTGAGGGGGTGAACAGCCCCTCCAAGGACGACGATTCACTGCTTCACCCTGGAACACTGACCAGCAATTCTGAGGATGTGAGTCACCTGGAAGCGACTGGAGAAGGAGTCAAAGAAAAGAGTAAATCGAGTGGCCTGTTCTTCAGGGATGGGAAGTGCCGCATTGATTACATCCTCGTTTACAGAAAGTCCAGTCCACAAATAGAAAAGCGAGAGGTCTTTGAGCGCAATATCAGAGCAGAAGGCCTGCAAATGGAAAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU48809 lncRNA downstream 65811 4929788 ~ 4930753 (-) True G39175
TU48808 lncRNA downstream 79970 4914003 ~ 4916594 (-) True G39174
TU48782 lncRNA downstream 210036 4785694 ~ 4786528 (-) True G39160
TU48565 lncRNA downstream 478932 4127007 ~ 4517632 (-) True G38965
TU48827 lncRNA upstream 438 5006135 ~ 5006607 (-) False G39189
TU48887 lncRNA upstream 200907 5206604 ~ 5209859 (-) True G39231
TU48922 lncRNA upstream 215074 5220771 ~ 5282686 (-) True G39245
TU48923 lncRNA upstream 228465 5234162 ~ 5250471 (-) True G39246
TU48968 lncRNA upstream 382496 5388193 ~ 5408760 (-) True G39281
AMCG00012705 mRNA downstream 17193 4934509 ~ 4979371 (-) True AMCG00012705
AMCG00012694 mRNA downstream 105666 4864869 ~ 4890898 (-) True AMCG00012694
AMCG00012692 mRNA downstream 149768 4840227 ~ 4846796 (-) True AMCG00012692
AMCG00012693 mRNA downstream 168788 4787534 ~ 4827776 (-) True AMCG00012693
AMCG00012689 mRNA downstream 223606 4760685 ~ 4772958 (-) True AMCG00012689
AMCG00012709 mRNA upstream 67188 5072885 ~ 5094228 (-) True AMCG00012709
AMCG00012708 mRNA upstream 91624 5097321 ~ 5122506 (-) True AMCG00012708
AMCG00012707 mRNA upstream 147578 5153275 ~ 5171222 (-) True AMCG00012707
AMCG00012710 mRNA upstream 185256 5190953 ~ 5203165 (-) True AMCG00012710
AMCG00012711 mRNA upstream 282331 5288028 ~ 5303893 (-) True AMCG00012711
TU47984 other downstream 2812401 2183885 ~ 2184163 (-) True G38490
TU47949 other downstream 3219343 1776854 ~ 1777221 (-) True G38458
TU47757 other downstream 4456973 523747 ~ 539591 (-) True AMCG00012628
TU49217 other upstream 1450024 6455721 ~ 6456178 (-) True G39487
TU49940 other upstream 4106744 9112441 ~ 9113076 (-) False AMCG00012829
TU50581 other upstream 7234699 12240396 ~ 12253443 (-) True AMCG00012888
TU50830 other upstream 8109196 13114893 ~ 13115487 (-) True G40778
TU52042 other upstream 12874528 17880225 ~ 17899426 (-) False AMCG00013038

Expression Profile