Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00012717 |
| length | 717 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 1 |
| gene id | AMCG00012717 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 5630403 ~ 5631119 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| K20243 | REP15; Rab15 effector protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU48966 | lncRNA | upstream | 193241 | 5436833 ~ 5437162 (+) | True | G39279 |
| TU48836 | lncRNA | upstream | 556277 | 5037547 ~ 5074126 (+) | True | G39193 |
| TU48821 | lncRNA | upstream | 674536 | 4949240 ~ 4955867 (+) | True | G39186 |
| TU48563 | lncRNA | upstream | 1112772 | 4517136 ~ 4517631 (+) | True | G38964 |
| TU48551 | lncRNA | upstream | 1256829 | 4370313 ~ 4373574 (+) | False | G38954 |
| TU49015 | lncRNA | downstream | 16655 | 5647774 ~ 5648107 (+) | True | G39321 |
| TU49089 | lncRNA | downstream | 291495 | 5922614 ~ 5923023 (+) | True | G39382 |
| TU49104 | lncRNA | downstream | 422029 | 6053148 ~ 6056572 (+) | True | AMCG00012734 |
| TU49169 | lncRNA | downstream | 653815 | 6284934 ~ 6287936 (+) | True | G39445 |
| TU49225 | lncRNA | downstream | 881529 | 6512648 ~ 6536393 (+) | True | G39490 |
| AMCG00012723 | mRNA | upstream | 861 | 5603313 ~ 5629542 (+) | True | AMCG00012723 |
| AMCG00012733 | mRNA | upstream | 122402 | 5507669 ~ 5508001 (+) | True | AMCG00012733 |
| AMCG00012719 | mRNA | upstream | 317885 | 5305061 ~ 5312518 (+) | True | AMCG00012719 |
| AMCG00012727 | mRNA | upstream | 352289 | 5264273 ~ 5278114 (+) | True | AMCG00012727 |
| AMCG00012724 | mRNA | upstream | 387200 | 5235166 ~ 5243203 (+) | True | AMCG00012724 |
| AMCG00012722 | mRNA | downstream | 8882 | 5640001 ~ 5646627 (+) | True | AMCG00012722 |
| AMCG00012725 | mRNA | downstream | 64012 | 5695131 ~ 5724754 (+) | True | AMCG00012725 |
| AMCG00012721 | mRNA | downstream | 100871 | 5731990 ~ 5763147 (+) | True | AMCG00012721 |
| AMCG00012720 | mRNA | downstream | 136087 | 5767206 ~ 5791485 (+) | True | AMCG00012720 |
| AMCG00012718 | mRNA | downstream | 176738 | 5807857 ~ 5823515 (+) | True | AMCG00012718 |
| TU48986 | other | upstream | 77636 | 5552417 ~ 5552767 (+) | True | G39297 |
| TU48550 | other | upstream | 1256829 | 4370313 ~ 4373574 (+) | True | G38954 |
| TU47823 | other | upstream | 4805695 | 820524 ~ 824708 (+) | False | AMCG00012639 |
| TU49057 | other | downstream | 176727 | 5807846 ~ 5823320 (+) | False | AMCG00012718 |
| TU49223 | other | downstream | 886289 | 6517408 ~ 6517921 (+) | False | AMCG00012748 |
| TU49477 | other | downstream | 2094369 | 7725488 ~ 7727828 (+) | True | G39670 |
| TU49527 | other | downstream | 2204227 | 7835346 ~ 7836214 (+) | True | G39709 |
| TU49939 | other | downstream | 3481341 | 9112460 ~ 9113101 (+) | False | AMCG00012820 |
