RNA id: AMCG00012732



Basic Information


Item Value
RNA id AMCG00012732
length 390
RNA type mRNA
GC content 0.54
exon number 4
gene id AMCG00012732
representative False

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 6052364 ~ 6063817 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ctcagcTCGGTGCCAAAACACGCTGACTATGTCTGTCAAGACTTCCCGAGTGCAGTAGAGCTAGCATCGACCTTTCCACTGTGCAACCAAGTTGAAACCATATGGATCATAGGTGGGGTTGAGGTGTATAAGGAGTCTGCAAGGCATCCCTGGTGTGATCTCATCTACCTCACTCATGTCATGGCTGACTTTGACTGTGACACCTACTTCCCAGAGTTTGATCGGGAAGtgtatgaacagctggaaaCGATTAACCTTGTTACAagTGTGTTTTCAATGCTGTGGGGAGCGCTGCCCTGTCTGCCCCCTCTTCCTGCCCCGCTGGAGAACGCCCCACCCCCCTGCAGTAGCCAGAAGCAGCCCCCAGGATGGCAGCCCCCACCTCAGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU49079 lncRNA downstream 157250 5816472 ~ 5895114 (-) True G39377
TU49078 lncRNA downstream 157250 5818186 ~ 5895114 (-) False G39377
TU49068 lncRNA downstream 240328 5778290 ~ 5812036 (-) True G39371
TU48984 lncRNA downstream 506295 5545834 ~ 5546069 (-) True G39295
TU48968 lncRNA downstream 643604 5388193 ~ 5408760 (-) True G39281
TU49166 lncRNA upstream 204630 6268235 ~ 6268938 (-) True G39443
TU49191 lncRNA upstream 221850 6285455 ~ 6287935 (-) True G39462
TU49269 lncRNA upstream 574902 6638507 ~ 6695924 (-) False AMCG00012751
TU49302 lncRNA upstream 709363 6772968 ~ 6847396 (-) True G39546
TU49313 lncRNA upstream 722851 6786456 ~ 6795733 (-) True G39556
AMCG00012730 mRNA downstream 55252 5990103 ~ 5997112 (-) True AMCG00012730
AMCG00012715 mRNA downstream 220850 5830618 ~ 5831514 (-) True AMCG00012715
AMCG00012716 mRNA downstream 246971 5792038 ~ 5805393 (-) True AMCG00012716
AMCG00012714 mRNA downstream 412832 5634465 ~ 5639532 (-) True AMCG00012714
AMCG00012713 mRNA downstream 615383 5424701 ~ 5436981 (-) True AMCG00012713
AMCG00012731 mRNA upstream 8318 6071923 ~ 6086826 (-) True AMCG00012731
AMCG00012735 mRNA upstream 171071 6234676 ~ 6239419 (-) True AMCG00012735
AMCG00012736 mRNA upstream 193225 6256830 ~ 6257924 (-) True AMCG00012736
AMCG00012742 mRNA upstream 226026 6289631 ~ 6327075 (-) True AMCG00012742
AMCG00012743 mRNA upstream 298844 6362449 ~ 6378254 (-) True AMCG00012743
TU47984 other downstream 3868201 2183885 ~ 2184163 (-) True G38490
TU47949 other downstream 4275143 1776854 ~ 1777221 (-) True G38458
TU47757 other downstream 5512773 523747 ~ 539591 (-) True AMCG00012628
TU49217 other upstream 392116 6455721 ~ 6456178 (-) True G39487
TU49940 other upstream 3048836 9112441 ~ 9113076 (-) False AMCG00012829
TU50581 other upstream 6176791 12240396 ~ 12253443 (-) True AMCG00012888
TU50830 other upstream 7051288 13114893 ~ 13115487 (-) True G40778
TU52042 other upstream 11816620 17880225 ~ 17899426 (-) False AMCG00013038