RNA id: AMCG00012776



Basic Information


Item Value
RNA id AMCG00012776
length 345
RNA type mRNA
GC content 0.59
exon number 2
gene id AMCG00012776
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 7840369 ~ 7841180 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGAAATCCCCTGCACGGGAGTTTACCTGCTGAGCACTTTGACATTGCAGCCAGTGCGCCAGTGGGTCTCAGGACACTCCCTCATCTGGTGGCGAGAGAAGCTGAAAGTCCCAATTCGGTGGACGAGGCGAGTCTCTGCTATTTCGTCCAGGAAAGCGAAATCGAGAGTCAGATCTCCTGCAGACTCCGGTTCCCCCGGAGTAAATTCAACTTCAACCCCTTCGGCCTGCGCTTTGGAAAGCGGGACCGGGGCACCGCGGCCCGGGGCAGGAGTGCTATCCCGGTGCCCAGCGCGCTGCTGCCCTACCTCCTCAAACTCAAACAGTCGGGACTGTCCACCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU49523 lncRNA downstream 12222 7827278 ~ 7828147 (-) True G39707
TU49465 lncRNA downstream 168727 7671236 ~ 7671642 (-) True G39662
TU49351 lncRNA downstream 689546 7150617 ~ 7150823 (-) True G39580
TU49319 lncRNA downstream 942132 6897987 ~ 6898237 (-) True G39561
TU49302 lncRNA downstream 992973 6772968 ~ 6847396 (-) True G39546
TU49559 lncRNA upstream 50397 7891577 ~ 7895726 (-) False AMCG00012782
TU49700 lncRNA upstream 427814 8268994 ~ 8269221 (-) True G39839
TU49798 lncRNA upstream 726872 8568052 ~ 8569889 (-) True G39929
TU49823 lncRNA upstream 819268 8660448 ~ 8667024 (-) True G39952
TU49886 lncRNA upstream 1058933 8900113 ~ 8901481 (-) True G40008
AMCG00012773 mRNA downstream 52717 7757077 ~ 7787652 (-) True AMCG00012773
AMCG00012774 mRNA downstream 98338 7734831 ~ 7742031 (-) True AMCG00012774
AMCG00012771 mRNA downstream 109546 7725488 ~ 7730823 (-) True AMCG00012771
AMCG00012772 mRNA downstream 120476 7702378 ~ 7719893 (-) True AMCG00012772
AMCG00012770 mRNA downstream 305930 7478394 ~ 7534439 (-) True AMCG00012770
AMCG00012783 mRNA upstream 43651 7884831 ~ 7891119 (-) True AMCG00012783
AMCG00012782 mRNA upstream 50309 7891489 ~ 7904455 (-) True AMCG00012782
AMCG00012781 mRNA upstream 66955 7908135 ~ 7928050 (-) True AMCG00012781
AMCG00012780 mRNA upstream 97302 7938482 ~ 7951629 (-) True AMCG00012780
AMCG00012779 mRNA upstream 114566 7955746 ~ 7960641 (-) True AMCG00012779
TU49217 other downstream 1384191 6455721 ~ 6456178 (-) True G39487
TU47984 other downstream 5656206 2183885 ~ 2184163 (-) True G38490
TU47949 other downstream 6063148 1776854 ~ 1777221 (-) True G38458
TU47757 other downstream 7300778 523747 ~ 539591 (-) True AMCG00012628
TU49940 other upstream 1271261 9112441 ~ 9113076 (-) False AMCG00012829
TU50581 other upstream 4399216 12240396 ~ 12253443 (-) True AMCG00012888
TU50830 other upstream 5273713 13114893 ~ 13115487 (-) True G40778
TU52042 other upstream 10039045 17880225 ~ 17899426 (-) False AMCG00013038
TU52041 other upstream 10112883 17954063 ~ 18043587 (-) False AMCG00013042

Expression Profile