RNA id: AMCG00012799



Basic Information


Item Value
RNA id AMCG00012799
length 774
RNA type mRNA
GC content 0.59
exon number 2
gene id AMCG00012799
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 8384777 ~ 8392408 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAGAATTTCGAGCAGAGTCCCCTCAAGAGGACTTTCAAGTCCAAGGTTCTTGCACATTTCCCAGAGAACATTGAGTGGAACCCCTTTGACCAAGATGCAGTCAACATGCTCTGCATGCCCAAGGGGCTGTCTTTCCGGACACAAGTGGACAACCGCGATCCCCAGTTCCACTCGTACCTCATCACCCGGGAGGACGGCTCGCGCACCTATGGCTTCGTGCACACCTTCTATGAGGAGGTGACCAGCAAACAGATCTGCACGGCCATGCAGACACTCTACCAGATGCACCACGCCGAGCACGCCGGCAGTGTGTGTGCCTCGTCCTCCTGCAGCATGGACTCACTGGCCAGCAGCCTGGACGAGGGAGACGCCACATCCCTCAACAAGCTCCACTGCTGCAGCTCCTATGACATCAGCCGTGACACACTCTACGTGTCCAAAGCCATCTGCCTCATCACCCCACTGCCCTTCATGCATGCCTGCCGCAAGTTCTTGTCCCAGCTGCACCGCGCCGTCACCTCCCAGCAGCCACCCCCCCTGCCCCTTGAGAGCTACATCCACAACGTTCTGTATGAGGTGCCCCTGCCGCCCCCCGGCCGCTCCCTCAAGTTCCACAGCGTTTACGAGCCTGTGGTGTGCCAGAGGCCCGGCCCCAGCGAGCTGCCCCTGGCGGACTACCCCCTTAGGGAGGCTTTTGAGCTGCTGGGGGTGGAAAACCTTGTGCAACTCTTCACCTGTGTCTTGTTGGAGATGCAGATCCTGCTTTATTCCCAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU49700 lncRNA downstream 115556 8268994 ~ 8269221 (-) True G39839
TU49559 lncRNA downstream 489051 7891577 ~ 7895726 (-) False AMCG00012782
TU49523 lncRNA downstream 556630 7827278 ~ 7828147 (-) True G39707
TU49465 lncRNA downstream 713135 7671236 ~ 7671642 (-) True G39662
TU49351 lncRNA downstream 1233954 7150617 ~ 7150823 (-) True G39580
TU49798 lncRNA upstream 175644 8568052 ~ 8569889 (-) True G39929
TU49823 lncRNA upstream 268040 8660448 ~ 8667024 (-) True G39952
TU49886 lncRNA upstream 507705 8900113 ~ 8901481 (-) True G40008
TU49922 lncRNA upstream 691252 9083660 ~ 9085793 (-) True G40039
TU50011 lncRNA upstream 844492 9236900 ~ 9257451 (-) True G40115
AMCG00012801 mRNA downstream 10305 8341859 ~ 8374472 (-) True AMCG00012801
AMCG00012796 mRNA downstream 47015 8331936 ~ 8337762 (-) True AMCG00012796
AMCG00012795 mRNA downstream 58848 8313773 ~ 8325929 (-) True AMCG00012795
AMCG00012793 mRNA downstream 78503 8302128 ~ 8306274 (-) True AMCG00012793
AMCG00012794 mRNA downstream 85803 8273954 ~ 8298974 (-) True AMCG00012794
AMCG00012802 mRNA upstream 20636 8413044 ~ 8438978 (-) True AMCG00012802
AMCG00012800 mRNA upstream 51588 8443996 ~ 8452153 (-) True AMCG00012800
AMCG00012804 mRNA upstream 71752 8464160 ~ 8479179 (-) True AMCG00012804
AMCG00012806 mRNA upstream 107229 8499637 ~ 8532718 (-) True AMCG00012806
AMCG00012805 mRNA upstream 143760 8536168 ~ 8553089 (-) True AMCG00012805
TU49217 other downstream 1928599 6455721 ~ 6456178 (-) True G39487
TU47984 other downstream 6200614 2183885 ~ 2184163 (-) True G38490
TU47949 other downstream 6607556 1776854 ~ 1777221 (-) True G38458
TU47757 other downstream 7845186 523747 ~ 539591 (-) True AMCG00012628
TU49940 other upstream 720033 9112441 ~ 9113076 (-) False AMCG00012829
TU50581 other upstream 3847988 12240396 ~ 12253443 (-) True AMCG00012888
TU50830 other upstream 4722485 13114893 ~ 13115487 (-) True G40778
TU52042 other upstream 9487817 17880225 ~ 17899426 (-) False AMCG00013038
TU52041 other upstream 9561655 17954063 ~ 18043587 (-) False AMCG00013042

Expression Profile