RNA id: AMCG00012809


Basic Information

Item Value
RNA id AMCG00012809
length 231
RNA type mRNA
GC content 0.57
exon number 2
gene id AMCG00012809
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 8612242 ~ 8616101 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CAGCCTTGGTATTATGGATGGGGGTTCAACCTACCGCGGGGACAGGCTCTTCTGGACAAGTGGAACCTCATTCCCGACTCCACTGACATCCTTATCACACACTGTCCTCCGCTAGGTTACGGTGTGATGACTGATGGCGCCACCACGTTCGTCAACGCCTCCGCCTGCACGGTGAACTTCCAGCCCATGAACCCGCCGATAGTGTTCGACTTGCCGACTCCAAGAAGCACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU49798 lncRNA downstream 42353 8568052 ~ 8569889 (-) True G39929
TU49700 lncRNA downstream 343021 8268994 ~ 8269221 (-) True G39839
TU49559 lncRNA downstream 716516 7891577 ~ 7895726 (-) False AMCG00012782
TU49523 lncRNA downstream 784095 7827278 ~ 7828147 (-) True G39707
TU49465 lncRNA downstream 940600 7671236 ~ 7671642 (-) True G39662
TU49823 lncRNA upstream 44347 8660448 ~ 8667024 (-) True G39952
TU49886 lncRNA upstream 284012 8900113 ~ 8901481 (-) True G40008
TU49922 lncRNA upstream 467559 9083660 ~ 9085793 (-) True G40039
TU50011 lncRNA upstream 620799 9236900 ~ 9257451 (-) True G40115
TU50084 lncRNA upstream 1070709 9686810 ~ 9690911 (-) True G40172
AMCG00012805 mRNA downstream 59153 8536168 ~ 8553089 (-) True AMCG00012805
AMCG00012806 mRNA downstream 79524 8499637 ~ 8532718 (-) True AMCG00012806
AMCG00012804 mRNA downstream 133063 8464160 ~ 8479179 (-) True AMCG00012804
AMCG00012800 mRNA downstream 160089 8443996 ~ 8452153 (-) True AMCG00012800
AMCG00012802 mRNA downstream 173264 8413044 ~ 8438978 (-) True AMCG00012802
AMCG00012808 mRNA upstream 21836 8637937 ~ 8650040 (-) True AMCG00012808
AMCG00012813 mRNA upstream 51216 8667317 ~ 8681599 (-) True AMCG00012813
AMCG00012814 mRNA upstream 122069 8738170 ~ 8747560 (-) True AMCG00012814
AMCG00012812 mRNA upstream 186781 8802882 ~ 8821156 (-) True AMCG00012812
AMCG00012821 mRNA upstream 230483 8846584 ~ 8849492 (-) True AMCG00012821
TU49217 other downstream 2156064 6455721 ~ 6456178 (-) True G39487
TU47984 other downstream 6428079 2183885 ~ 2184163 (-) True G38490
TU47949 other downstream 6835021 1776854 ~ 1777221 (-) True G38458
TU47757 other downstream 8072651 523747 ~ 539591 (-) True AMCG00012628
TU49940 other upstream 496340 9112441 ~ 9113076 (-) False AMCG00012829
TU50581 other upstream 3624295 12240396 ~ 12253443 (-) True AMCG00012888
TU50830 other upstream 4498792 13114893 ~ 13115487 (-) True G40778
TU52042 other upstream 9264124 17880225 ~ 17899426 (-) False AMCG00013038
TU52041 other upstream 9337962 17954063 ~ 18043587 (-) False AMCG00013042

Expression Profile