Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00012811 |
| length | 1353 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 13 |
| gene id | AMCG00012811 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 8795168 ~ 8799438 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0001889 | liver development | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005741 | mitochondrial outer membrane | cellular_component |
| id | description |
|---|---|
| K07277 | SAM50, TOB55, bamA; outer membrane protein insertion porin family |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU49822 | lncRNA | upstream | 127704 | 8666754 ~ 8667464 (+) | True | G39951 |
| TU49788 | lncRNA | upstream | 225277 | 8536233 ~ 8569891 (+) | False | AMCG00012803 |
| TU49733 | lncRNA | upstream | 453115 | 8335898 ~ 8342053 (+) | True | AMCG00012797 |
| TU49699 | lncRNA | upstream | 525947 | 8268994 ~ 8269221 (+) | True | G39838 |
| TU49633 | lncRNA | upstream | 662604 | 8057019 ~ 8132564 (+) | True | G39776 |
| TU49901 | lncRNA | downstream | 251649 | 9051087 ~ 9053819 (+) | True | G40022 |
| TU49921 | lncRNA | downstream | 284636 | 9084074 ~ 9085689 (+) | False | AMCG00012818 |
| TU49926 | lncRNA | downstream | 291876 | 9091314 ~ 9093846 (+) | True | G40041 |
| TU50015 | lncRNA | downstream | 465440 | 9264878 ~ 9265093 (+) | True | G40119 |
| TU50017 | lncRNA | downstream | 494893 | 9294331 ~ 9294642 (+) | True | G40121 |
| AMCG00012807 | mRNA | upstream | 187791 | 8571458 ~ 8607377 (+) | True | AMCG00012807 |
| AMCG00012803 | mRNA | upstream | 225277 | 8555090 ~ 8569891 (+) | True | AMCG00012803 |
| AMCG00012798 | mRNA | upstream | 351526 | 8442404 ~ 8443642 (+) | True | AMCG00012798 |
| AMCG00012797 | mRNA | upstream | 449313 | 8338155 ~ 8345855 (+) | False | AMCG00012797 |
| AMCG00012785 | mRNA | upstream | 718021 | 8041802 ~ 8077147 (+) | True | AMCG00012785 |
| AMCG00012810 | mRNA | downstream | 24059 | 8823497 ~ 8844351 (+) | True | AMCG00012810 |
| AMCG00012815 | mRNA | downstream | 54643 | 8854081 ~ 8872158 (+) | True | AMCG00012815 |
| AMCG00012817 | mRNA | downstream | 239884 | 9039322 ~ 9043541 (+) | True | AMCG00012817 |
| AMCG00012816 | mRNA | downstream | 264879 | 9064317 ~ 9077901 (+) | True | AMCG00012816 |
| AMCG00012818 | mRNA | downstream | 284224 | 9083662 ~ 9085700 (+) | True | AMCG00012818 |
| TU49527 | other | upstream | 958954 | 7835346 ~ 7836214 (+) | True | G39709 |
| TU49477 | other | upstream | 1067340 | 7725488 ~ 7727828 (+) | True | G39670 |
| TU49223 | other | upstream | 2277247 | 6517408 ~ 6517921 (+) | False | AMCG00012748 |
| TU49057 | other | upstream | 2971848 | 5807846 ~ 5823320 (+) | False | AMCG00012718 |
| TU48986 | other | upstream | 3242401 | 5552417 ~ 5552767 (+) | True | G39297 |
| TU49939 | other | downstream | 313022 | 9112460 ~ 9113101 (+) | False | AMCG00012820 |
| TU50138 | other | downstream | 1637469 | 10436907 ~ 10444447 (+) | True | G40224 |
| TU50139 | other | downstream | 1637469 | 10436907 ~ 10444447 (+) | False | G40224 |
| TU50140 | other | downstream | 1637469 | 10436907 ~ 10444447 (+) | False | G40224 |
| TU50630 | other | downstream | 3689137 | 12488575 ~ 12535929 (+) | True | G40629 |
