Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU50179 |
| length | 946 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 2 |
| gene id | AMCG00012848 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 10540728 ~ 10541960 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU50128 | lncRNA | upstream | 116357 | 10375031 ~ 10424371 (+) | True | G40214 |
| TU50116 | lncRNA | upstream | 368265 | 10172254 ~ 10172463 (+) | True | G40203 |
| TU50050 | lncRNA | upstream | 1066508 | 9473973 ~ 9474220 (+) | True | G40146 |
| TU50049 | lncRNA | upstream | 1066860 | 9473545 ~ 9473868 (+) | True | G40145 |
| TU50017 | lncRNA | upstream | 1246086 | 9294331 ~ 9294642 (+) | True | G40121 |
| TU50237 | lncRNA | downstream | 198472 | 10740432 ~ 10743104 (+) | True | G40303 |
| TU50386 | lncRNA | downstream | 561865 | 11103825 ~ 11159087 (+) | False | G40436 |
| TU50385 | lncRNA | downstream | 615074 | 11157034 ~ 11159087 (+) | True | G40436 |
| TU50467 | lncRNA | downstream | 752257 | 11294217 ~ 11354359 (+) | True | G40496 |
| TU50464 | lncRNA | downstream | 782663 | 11324623 ~ 11354359 (+) | False | G40496 |
| AMCG00012844 | mRNA | upstream | 6123 | 10531979 ~ 10534605 (+) | True | AMCG00012844 |
| AMCG00012843 | mRNA | upstream | 48251 | 10471865 ~ 10492477 (+) | True | AMCG00012843 |
| AMCG00012839 | mRNA | upstream | 130447 | 10409327 ~ 10410281 (+) | True | AMCG00012839 |
| AMCG00012838 | mRNA | upstream | 226478 | 9883124 ~ 10314250 (+) | True | AMCG00012838 |
| AMCG00012836 | mRNA | upstream | 770057 | 9751636 ~ 9770671 (+) | True | AMCG00012836 |
| AMCG00012850 | mRNA | downstream | 4591 | 10546551 ~ 10550066 (+) | True | AMCG00012850 |
| AMCG00012849 | mRNA | downstream | 48238 | 10590198 ~ 10608349 (+) | True | AMCG00012849 |
| AMCG00012859 | mRNA | downstream | 124800 | 10666760 ~ 10685175 (+) | True | AMCG00012859 |
| AMCG00012860 | mRNA | downstream | 144593 | 10686553 ~ 10689804 (+) | True | AMCG00012860 |
| AMCG00012855 | mRNA | downstream | 157081 | 10699041 ~ 10740121 (+) | True | AMCG00012855 |
| TU50138 | other | upstream | 96281 | 10436907 ~ 10444447 (+) | True | G40224 |
| TU50139 | other | upstream | 96281 | 10436907 ~ 10444447 (+) | False | G40224 |
| TU50140 | other | upstream | 96281 | 10436907 ~ 10444447 (+) | False | G40224 |
| TU49939 | other | upstream | 1427627 | 9112460 ~ 9113101 (+) | False | AMCG00012820 |
| TU49527 | other | upstream | 2704514 | 7835346 ~ 7836214 (+) | True | G39709 |
| TU50630 | other | downstream | 1946615 | 12488575 ~ 12535929 (+) | True | G40629 |
| TU50637 | other | downstream | 1947839 | 12489799 ~ 12490422 (+) | False | AMCG00012894 |
| TU51090 | other | downstream | 3886353 | 14428313 ~ 14433201 (+) | True | G40999 |
| TU51114 | other | downstream | 3986202 | 14528162 ~ 14529806 (+) | False | AMCG00012940 |
| TU51166 | other | downstream | 4090397 | 14632357 ~ 14633413 (+) | True | G41059 |
