Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00012948 |
| length | 1125 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 2 |
| gene id | AMCG00012948 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 14795042 ~ 14796838 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008535 | respiratory chain complex IV assembly | biological_process |
| GO:0001654 | eye development | biological_process |
| GO:0006825 | copper ion transport | biological_process |
| GO:0006878 | cellular copper ion homeostasis | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0005507 | copper ion binding | molecular_function |
| id | description |
|---|---|
| K23755 | SCO2; protein SCO2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51218 | lncRNA | downstream | 58413 | 14733735 ~ 14736629 (-) | True | G41102 |
| TU51203 | lncRNA | downstream | 77478 | 14717234 ~ 14717564 (-) | True | G41088 |
| TU51152 | lncRNA | downstream | 206916 | 14587845 ~ 14588126 (-) | True | G41047 |
| TU51122 | lncRNA | downstream | 265269 | 14528154 ~ 14529773 (-) | True | G41020 |
| TU51133 | lncRNA | downstream | 284357 | 14508557 ~ 14510685 (-) | True | G41030 |
| TU51268 | lncRNA | upstream | 45405 | 14842243 ~ 14922316 (-) | True | G41138 |
| TU51335 | lncRNA | upstream | 278596 | 15075434 ~ 15077820 (-) | True | G41191 |
| TU51378 | lncRNA | upstream | 438782 | 15235620 ~ 15235862 (-) | True | G41224 |
| TU51406 | lncRNA | upstream | 440452 | 15237290 ~ 15278312 (-) | True | G41243 |
| TU51558 | lncRNA | upstream | 769671 | 15566509 ~ 15569851 (-) | True | G41369 |
| AMCG00012943 | mRNA | downstream | 22435 | 14757801 ~ 14772607 (-) | True | AMCG00012943 |
| AMCG00012944 | mRNA | downstream | 92440 | 14675085 ~ 14702602 (-) | True | AMCG00012944 |
| AMCG00012937 | mRNA | downstream | 320461 | 14452415 ~ 14474581 (-) | True | AMCG00012937 |
| AMCG00012938 | mRNA | downstream | 361886 | 14424811 ~ 14433156 (-) | True | AMCG00012938 |
| AMCG00012931 | mRNA | downstream | 450610 | 14340416 ~ 14344432 (-) | True | AMCG00012931 |
| AMCG00012955 | mRNA | upstream | 255125 | 15051963 ~ 15065613 (-) | True | AMCG00012955 |
| AMCG00012956 | mRNA | upstream | 281260 | 15078098 ~ 15079375 (-) | True | AMCG00012956 |
| AMCG00012959 | mRNA | upstream | 369112 | 15165950 ~ 15174248 (-) | True | AMCG00012959 |
| AMCG00012958 | mRNA | upstream | 379450 | 15176288 ~ 15212332 (-) | True | AMCG00012958 |
| AMCG00012964 | mRNA | upstream | 422495 | 15219333 ~ 15233107 (-) | True | AMCG00012964 |
| TU50830 | other | downstream | 1679555 | 13114893 ~ 13115487 (-) | True | G40778 |
| TU50581 | other | downstream | 2541599 | 12240396 ~ 12253443 (-) | True | AMCG00012888 |
| TU49940 | other | downstream | 5681966 | 9112441 ~ 9113076 (-) | False | AMCG00012829 |
| TU49217 | other | downstream | 8338864 | 6455721 ~ 6456178 (-) | True | G39487 |
| TU47984 | other | downstream | 12610879 | 2183885 ~ 2184163 (-) | True | G38490 |
| TU52042 | other | upstream | 3083387 | 17880225 ~ 17899426 (-) | False | AMCG00013038 |
| TU52041 | other | upstream | 3157225 | 17954063 ~ 18043587 (-) | False | AMCG00013042 |
| TU52091 | other | upstream | 3379223 | 18176061 ~ 18191522 (-) | True | G41807 |
| TU52133 | other | upstream | 3445912 | 18242750 ~ 18244093 (-) | True | G41836 |
| TU52315 | other | upstream | 4180222 | 18977060 ~ 18998766 (-) | True | AMCG00013071 |
