Item | Value |
---|---|
RNA id | AMCG00012966 |
length | 700 |
RNA type | mRNA |
GC content | 0.46 |
exon number | 4 |
gene id | AMCG00012966 |
representative | True |
Item | Value |
---|---|
chromosome id | CM030125.1 |
NCBI id | CM030125.1 |
chromosome length | 49972098 |
location | 15376476 ~ 15378948 (-) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
id | name | namespace |
---|---|---|
GO:0008033 | tRNA processing | biological_process |
GO:0016491 | oxidoreductase activity | molecular_function |
id | description |
---|---|
K05545 | DUS4; tRNA-dihydrouridine synthase 4 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU51406 | lncRNA | downstream | 98164 | 15237290 ~ 15278312 (-) | True | G41243 |
TU51378 | lncRNA | downstream | 140614 | 15235620 ~ 15235862 (-) | True | G41224 |
TU51335 | lncRNA | downstream | 298656 | 15075434 ~ 15077820 (-) | True | G41191 |
TU51268 | lncRNA | downstream | 454160 | 14842243 ~ 14922316 (-) | True | G41138 |
TU51218 | lncRNA | downstream | 639847 | 14733735 ~ 14736629 (-) | True | G41102 |
TU51558 | lncRNA | upstream | 187561 | 15566509 ~ 15569851 (-) | True | G41369 |
TU51575 | lncRNA | upstream | 259931 | 15638879 ~ 15639990 (-) | True | G41386 |
TU51580 | lncRNA | upstream | 340607 | 15719555 ~ 15722457 (-) | True | AMCG00012985 |
TU51593 | lncRNA | upstream | 411344 | 15790292 ~ 15822009 (-) | True | G41402 |
TU51637 | lncRNA | upstream | 576487 | 15955435 ~ 15956038 (-) | True | G41442 |
AMCG00012968 | mRNA | downstream | 2810 | 15355091 ~ 15373666 (-) | True | AMCG00012968 |
AMCG00012965 | mRNA | downstream | 22320 | 15341157 ~ 15354156 (-) | True | AMCG00012965 |
AMCG00012970 | mRNA | downstream | 51753 | 15317093 ~ 15324723 (-) | True | AMCG00012970 |
AMCG00012971 | mRNA | downstream | 72105 | 15267214 ~ 15304371 (-) | True | AMCG00012971 |
AMCG00012964 | mRNA | downstream | 143369 | 15219333 ~ 15233107 (-) | True | AMCG00012964 |
AMCG00012967 | mRNA | upstream | 26817 | 15405765 ~ 15412645 (-) | True | AMCG00012967 |
AMCG00012969 | mRNA | upstream | 98938 | 15477886 ~ 15485986 (-) | True | AMCG00012969 |
AMCG00012977 | mRNA | upstream | 113413 | 15492361 ~ 15509522 (-) | True | AMCG00012977 |
AMCG00012975 | mRNA | upstream | 133524 | 15512472 ~ 15522929 (-) | True | AMCG00012975 |
AMCG00012979 | mRNA | upstream | 157721 | 15536669 ~ 15537223 (-) | True | AMCG00012979 |
TU50830 | other | downstream | 2260989 | 13114893 ~ 13115487 (-) | True | G40778 |
TU50581 | other | downstream | 3123033 | 12240396 ~ 12253443 (-) | True | AMCG00012888 |
TU49940 | other | downstream | 6263400 | 9112441 ~ 9113076 (-) | False | AMCG00012829 |
TU49217 | other | downstream | 8920298 | 6455721 ~ 6456178 (-) | True | G39487 |
TU47984 | other | downstream | 13192313 | 2183885 ~ 2184163 (-) | True | G38490 |
TU52042 | other | upstream | 2501277 | 17880225 ~ 17899426 (-) | False | AMCG00013038 |
TU52041 | other | upstream | 2575115 | 17954063 ~ 18043587 (-) | False | AMCG00013042 |
TU52091 | other | upstream | 2797113 | 18176061 ~ 18191522 (-) | True | G41807 |
TU52133 | other | upstream | 2863802 | 18242750 ~ 18244093 (-) | True | G41836 |
TU52315 | other | upstream | 3598112 | 18977060 ~ 18998766 (-) | True | AMCG00013071 |