RNA id: AMCG00012978


Basic Information

Item Value
RNA id AMCG00012978
length 263
RNA type mRNA
GC content 0.47
exon number 2
gene id AMCG00012978
representative False

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 15570906 ~ 15573468 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GAAAGATTTTGCAAAAACCTCACGCAATGTCAGCTCCAAATGCAGAAGAGAGGCGGGTTTGCTGGCGGGCGAGAGATGAGTTATGGCGATGCCTGGATGAGAATGAGGATAAAGGGACACACTGCGAGAAGCTGCGAAAGCAGTTTGAGTCCAGCTGTCCAGCTCAGTGGgtgaaatatttcaataaacgAAGAGACTTTTTGAAGTACAAGGAAAGGATTCAAACAGAGGGGTTTGAGCCTGTGGACCAGTCTACCAAATTA

Function

GO:

id name namespace
GO:1902600 proton transmembrane transport biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005739 mitochondrion cellular_component
GO:0004129 cytochrome-c oxidase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU51458 lncRNA upstream 1922 15566505 ~ 15569834 (+) False AMCG00012973
TU51457 lncRNA upstream 12451 15556146 ~ 15559305 (+) True G41282
TU51439 lncRNA upstream 88435 15480691 ~ 15483321 (+) True G41265
TU51392 lncRNA upstream 270195 15301188 ~ 15301561 (+) False AMCG00012961
TU51390 lncRNA upstream 283940 15285341 ~ 15287816 (+) True G41230
TU51480 lncRNA downstream 147299 15719507 ~ 15722866 (+) True G41303
TU51492 lncRNA downstream 210218 15782426 ~ 15790144 (+) False AMCG00012987
TU51493 lncRNA downstream 210218 15782426 ~ 15791627 (+) True AMCG00012987
TU51494 lncRNA downstream 210218 15782426 ~ 15790144 (+) False AMCG00012987
TU51495 lncRNA downstream 210218 15782426 ~ 15790144 (+) False AMCG00012987
AMCG00012973 mRNA upstream 1813 15566493 ~ 15569943 (+) True AMCG00012973
AMCG00012974 mRNA upstream 17704 15545635 ~ 15554052 (+) True AMCG00012974
AMCG00012972 mRNA upstream 40147 15526034 ~ 15531609 (+) True AMCG00012972
AMCG00012963 mRNA upstream 95886 15420843 ~ 15475870 (+) True AMCG00012963
AMCG00012961 mRNA upstream 254412 15297962 ~ 15317344 (+) True AMCG00012961
AMCG00012980 mRNA downstream 44049 15616257 ~ 15618444 (+) True AMCG00012980
AMCG00012982 mRNA downstream 48527 15620735 ~ 15631003 (+) True AMCG00012982
AMCG00012983 mRNA downstream 59218 15631426 ~ 15639738 (+) True AMCG00012983
AMCG00012986 mRNA downstream 133390 15705598 ~ 15715080 (+) True AMCG00012986
AMCG00012987 mRNA downstream 210156 15782364 ~ 15790169 (+) False AMCG00012987
TU51437 other upstream 92390 15477179 ~ 15479366 (+) True G41264
TU51320 other upstream 435027 15130795 ~ 15136729 (+) False AMCG00012954
TU51166 other upstream 938343 14632357 ~ 14633413 (+) True G41059
TU51114 other upstream 1041950 14528162 ~ 14529806 (+) False AMCG00012940
TU51090 other upstream 1138555 14428313 ~ 14433201 (+) True G40999
TU51470 other downstream 48577 15620785 ~ 15630627 (+) False AMCG00012982
TU52302 other downstream 3453353 19025561 ~ 19029278 (+) True G41978
TU52747 other downstream 5697467 21269675 ~ 21278728 (+) True G42326
TU52756 other downstream 5798635 21370843 ~ 21418787 (+) True AMCG00013126
TU52772 other downstream 5854452 21426660 ~ 21486808 (+) True G42344

Expression Profile