RNA id: AMCG00013013


Basic Information

Item Value
RNA id AMCG00013013
length 3088
RNA type mRNA
GC content 0.43
exon number 8
gene id AMCG00013013
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16756387 ~ 16768362 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AACTATAAGGaatgtctttttctctctttctatctccaGCTCAGTGAGCGCTATGGGCCGGTGTTGACTGTGTATCTGGGGCGGAAGCGCTGTGTGGTTCTGGTGGGGTACAAGGCTGTCCAAGAGGCTCTGGTGGACCATTCAGAGTCATTTTGTGGGAGGGAGCCCATCCCATTTTTCAACAGAATAAATAGGGGCTATggacTGGGCATCAGTAATGGAGAGCGATGGAGGCAGCTGCGGCAGTTCACTGTGACCACGCTAAGGGACTTCAACATGGGGAAGAACAAATTGGAGACCTGGATTCATGAGGAGGCCAGACACCTGATTGAGGAACTGGAGTACACAaaggggTCTCCCAGTGACCCTACACTCCTGTTGAATCTCTCAGTGTCCAATGTGATCTGCTCTCTTGTGTTCGGGTCACGCTTCGACTACCAGGACCAGAGGTTTCTAaggctgctgcagctgctgaaagAGATGGTGCATGGCATGAGAGGGCCCTGGGTCCAGCTGTACAACACTTTCCCTACCATCATGGACCTGCTGCCCGGGCCGCACAAGAACGTCTTTGCTAGTGCCCAGCAGCTGGCTGATTTCATGGAGGATTCCGTGAAGGAGCACAAGCAGACGCTGAGGTCCACCCGCCCTCGGGACTTCATCGACTGCTTCCTGCTCCGACAGGAACAGGAGAAGAACAATTCTGATAGTGAGTTCAACTCTCATAACCTCATTTACACAATCCTGGGTCTGTTCATCGCTGGCACAGAGACCACCAGCACAACACTGAGATACATTCTGATGCTGCTTATCAAGTACCCACAAGTGCAAGAGAGGATTCAGCAGGAGATTAAGGCTGTGATCGGGGCACAGCGTCGCCCAGCCCTGGAGGACCGCACAGCCATGCCCTTCACAGATGCAGTGATCCACGAGTCTCAGCGGCTCCTGGACACTGTGCCCATGAACCTGCCCCACATGGCCACCCAGGACATCTTCTTCAGGGGCTACACTATCCCCAAGGGCACCATGGTCATCCCCTTGCTTCACTCGGTACTGCAAGACCAGGAGCACTGGGTCTCCCCAGATGCCTTCAACCCCCATCACTTCTTGGATGAGCAGGGCCGCTTCAAGAGGCACCCAGCTTTCATGGCCTTTTCTGCAGGGAAGCGTGTCTGTGCGGGGGAGAACCTGGCCCGAGCCGAGCTCTTCATCTTCCTGGTGTCCCTGCTGCAGCGCTTCTCCTTCAGTTGTCCACTGGGGCCGGCATCCATCTGCATCACCCCAGAACGCAGTGCCTTCGCAAGTGTACCACAATCCTACCAGCTCATTGCCACACCCCGGTGAAACCAGACAATGACTACAGACTtactggagaaaaataaatacctaaacCCCATTTTGCCAAATTACAAGGCTGAGATGTGCCCCACCCACATTCTGTCACCGAGCCCTCTTCATGGACCCAGTCAGTTTTTATAGGGATGCATTTTCAGGGGAGCACACAAAAGACACCATCCAATGCATCCACCACTGATTTGCATGTGAAGTGcatgaaaatgcaatttttaTCCAAGTTCtataaaacaaagcagttaGTTAAAATTGGTTCAGTTTGATCTAGAACCTCGTTAGAAGACTAAAACTATTAATCATGAGTGGCATTTACCTTGTCATTCACTTCTGGTGactaattatataataatcgtgatcaaacacacacagaaatgtatgCTGTAGTTGGCTTCTGTTTTACCCTGCTATGGAAAGAAGTTTGattctttacaaaaaatatgtattttagagCAAAAATGCAGAATTGTACATTATGGTTGACCTTCAAAATAATTTTGTCCCGTCATTTTGGATTTGGGATGTGTCCAATGGGACAAATTTGAATAACTCAGGAAGAAAAAGCCATCCGTCCAAATAAATGAAAGTCCATATTACTactataaattaaatgcatgcctAGCCTCCATTGTTGTAAaggatattatttattttgagtacATAACCAGATGGCAGCAGTGTCactataattattaaaataatgacaaataaaatgtgtaaatatttgggttactgtgtgttttcctttaacgtcttgaattgaattaatcCAAAAGATGCTACATGtgatttttaatcaaaacagagatgtgtttactgtatttttaaatacaaaatagatcAACATATGTGGtatcttttacattttcatgatgaaagtcttaataaaatatatccCTTGCAGTAGTATCATGTGATTAAAAAAGTAACTAAATAGCTTTACAAAAGTAAACCATAGACATAATACTATTCTGAGCTGTGTCTTTAgccttattttctctctgttcaGCAGTTGATTATATGCCTTACTGCCTATTGGTGGGGGGCAAATCTGGTGTAATGTGACTGGATGATCAGGAGCAGCGGCAGCCCGCCATTAGGGGCCAGTGGGGCTGGCTGAGGAGACAAATTAGCCTTGAACGGTGACTGGCAGGCAGCACTGCCTGTTAGCCACATCGTAAAAACACCTCACACGAAAACCCGCCTCCTAcgacttttacattttttttctcaataatgcattttcaaattgaaaactaCGGCAAGACTAACTGCAGCAGCACAGTATGACTTGAAATGGTGAGTTGATTTCACTTTCCAATAATATAGACTTTGAACAAATATGCCAGATAAATACAGAACCATTTTGtcataaaatgaatacattctctttcaaaaattatatttcatagtGGTTGGTTTATGTATTGTAGTATGCAGGGGTTGGTCTCTTATCGACTCATTACTTCCTTATTCGAACATTTATAATCAATCTCTCTTGTgacctttttatattttgcgTTATCATGTACCTTTATTGGGACAggttacaatgtaaatatttgatttgctCTTAAAAAAGTATAACCTTAAATATCAACTAAAAAGATTATGATACTATgaatatatcaataatacaatGTGGTTGGTAGctctaaaatatttgtatttgtttataaaggggCGAGTTTGCTTAATGATGTAtcctgcttaaaaaataaacttttactACACTCTA

Function

GO: NA

KEGG:

id description
K07416 CYP2F; cytochrome P450 family 2 subfamily F

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU51754 lncRNA downstream 119946 16634962 ~ 16636441 (-) False AMCG00013018
TU51752 lncRNA downstream 132614 16623419 ~ 16623773 (-) True G41538
TU51729 lncRNA downstream 422792 16333231 ~ 16333595 (-) True G41518
TU51721 lncRNA downstream 538792 16217381 ~ 16217595 (-) True G41510
TU51713 lncRNA downstream 548210 16169309 ~ 16208177 (-) True G41506
TU51835 lncRNA upstream 378353 17146715 ~ 17146981 (-) True G41612
TU51850 lncRNA upstream 533781 17302143 ~ 17302892 (-) True G41627
TU51871 lncRNA upstream 708500 17476862 ~ 17477270 (-) True G41647
TU51872 lncRNA upstream 709453 17477815 ~ 17479389 (-) True G41648
TU51885 lncRNA upstream 742771 17511133 ~ 17511904 (-) True G41655
AMCG00013014 mRNA downstream 20591 16732929 ~ 16735796 (-) True AMCG00013014
AMCG00013011 mRNA downstream 37730 16716516 ~ 16718657 (-) True AMCG00013011
AMCG00013012 mRNA downstream 69083 16678160 ~ 16687304 (-) True AMCG00013012
AMCG00013018 mRNA downstream 117300 16630231 ~ 16639087 (-) True AMCG00013018
AMCG00013008 mRNA downstream 222540 16532750 ~ 16533847 (-) True AMCG00013008
AMCG00013019 mRNA upstream 15291 16783653 ~ 16823491 (-) True AMCG00013019
AMCG00013021 mRNA upstream 75471 16843833 ~ 16889951 (-) True AMCG00013021
AMCG00013020 mRNA upstream 154007 16922369 ~ 16979543 (-) True AMCG00013020
AMCG00013022 mRNA upstream 361045 17129407 ~ 17135059 (-) True AMCG00013022
AMCG00013026 mRNA upstream 635017 17403379 ~ 17412455 (-) True AMCG00013026
TU50830 other downstream 3640900 13114893 ~ 13115487 (-) True G40778
TU50581 other downstream 4502944 12240396 ~ 12253443 (-) True AMCG00012888
TU49940 other downstream 7643311 9112441 ~ 9113076 (-) False AMCG00012829
TU49217 other downstream 10300209 6455721 ~ 6456178 (-) True G39487
TU47984 other downstream 14572224 2183885 ~ 2184163 (-) True G38490
TU52042 other upstream 1111863 17880225 ~ 17899426 (-) False AMCG00013038
TU52041 other upstream 1185701 17954063 ~ 18043587 (-) False AMCG00013042
TU52091 other upstream 1407699 18176061 ~ 18191522 (-) True G41807
TU52133 other upstream 1474388 18242750 ~ 18244093 (-) True G41836
TU52315 other upstream 2208698 18977060 ~ 18998766 (-) True AMCG00013071

Expression Profile