RNA id: TU51754



Basic Information


Item Value
RNA id TU51754
length 213
lncRNA type sense_over
GC content 0.54
exon number 2
gene id AMCG00013018
representative False

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16630231 ~ 16639087 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAGACGAGGTCTTCGAGAAGAAGCAGAAGTTGCTGGATGTATCCTTGGTGGGCGAGGAGCAGCAGCGTCTATGTGACGAGCTGCAGGAGACCAAGCGCAAGGCCCAGCGGCGCTCACTAGGCAACATCAGGTTCATTGGGGAGCTGTTCAAGGTGAAGATGCTGGTGAAGAAAACCATGCACAATTGCATCGTCAAGCTGTTGAAGAACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU51752 lncRNA downstream 11189 16623419 ~ 16623773 (-) True G41538
TU51729 lncRNA downstream 301367 16333231 ~ 16333595 (-) True G41518
TU51721 lncRNA downstream 417367 16217381 ~ 16217595 (-) True G41510
TU51713 lncRNA downstream 426785 16169309 ~ 16208177 (-) True G41506
TU51660 lncRNA downstream 599026 16035647 ~ 16035936 (-) True G41460
TU51835 lncRNA upstream 510274 17146715 ~ 17146981 (-) True G41612
TU51850 lncRNA upstream 665702 17302143 ~ 17302892 (-) True G41627
TU51871 lncRNA upstream 840421 17476862 ~ 17477270 (-) True G41647
TU51872 lncRNA upstream 841374 17477815 ~ 17479389 (-) True G41648
TU51885 lncRNA upstream 874692 17511133 ~ 17511904 (-) True G41655
AMCG00013008 mRNA downstream 101115 16532750 ~ 16533847 (-) True AMCG00013008
AMCG00013007 mRNA downstream 383752 16250137 ~ 16251210 (-) True AMCG00013007
AMCG00013003 mRNA downstream 480107 16146243 ~ 16154855 (-) True AMCG00013003
AMCG00013001 mRNA downstream 506729 16108615 ~ 16128233 (-) True AMCG00013001
AMCG00013004 mRNA downstream 530543 16100316 ~ 16104419 (-) True AMCG00013004
AMCG00013012 mRNA upstream 41719 16678160 ~ 16687304 (-) True AMCG00013012
AMCG00013011 mRNA upstream 80075 16716516 ~ 16718657 (-) True AMCG00013011
AMCG00013014 mRNA upstream 96488 16732929 ~ 16735796 (-) True AMCG00013014
AMCG00013013 mRNA upstream 119946 16756387 ~ 16768362 (-) True AMCG00013013
AMCG00013019 mRNA upstream 147212 16783653 ~ 16823491 (-) True AMCG00013019
TU50830 other downstream 3519475 13114893 ~ 13115487 (-) True G40778
TU50581 other downstream 4381519 12240396 ~ 12253443 (-) True AMCG00012888
TU49940 other downstream 7521886 9112441 ~ 9113076 (-) False AMCG00012829
TU49217 other downstream 10178784 6455721 ~ 6456178 (-) True G39487
TU47984 other downstream 14450799 2183885 ~ 2184163 (-) True G38490
TU52042 other upstream 1243784 17880225 ~ 17899426 (-) False AMCG00013038
TU52041 other upstream 1317622 17954063 ~ 18043587 (-) False AMCG00013042
TU52091 other upstream 1539620 18176061 ~ 18191522 (-) True G41807
TU52133 other upstream 1606309 18242750 ~ 18244093 (-) True G41836
TU52315 other upstream 2340619 18977060 ~ 18998766 (-) True AMCG00013071

Expression Profile