RNA id: AMCG00013033



Basic Information


Item Value
RNA id AMCG00013033
length 660
RNA type mRNA
GC content 0.53
exon number 7
gene id AMCG00013033
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 17583125 ~ 17591701 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAAGAAATTGAAGCCGAGGAGCTTGTTCCTCCTGGAGGTGGATGGTTTAGTTTACCAAAcatctaatgtattatttgtccacagtggggtggtggtggggactTCCCTGTCCCAGTACCTTCTGGAGAAGTCTCGGGTTGTTTTCCAGGCCAGTGGGGAAAGGAACTATCATGTGTTTTACGAGATGCTGGCCGGACTGAGTGAGCAGTGCAAAGAAGACCTCTACCTGCAGGGAGCAGAGACATACTTCTATCTCAATCAGAACGACTCGTATGAGCTGGCCGTGATCAATGACTCGGAGACGCGCATCGTGGCCAGTCTGCTGCAGGTCTCGGCCGACATCCTGCAGACCGCCATCACTCACCGCGTCACGGAGACCTCGTACGATAGGATCTACTGCCCCCTGTCTGTAGAAAGTGCCATAGAATCCAGGGACGCCATTGCCAAGGCCTTGTATTCGGTGTTGTTCGACTGGCTGCTGGACAGGATCAACGAGTGGCTGGTACCCAGAGAGATGGACAGCTCCGTGGGCATCGTGGACATCTATGGGTTTGAGGACCTGGGGGTGAACAGCTTCGAGCAGCTGTGTATCAATTATGCTAATGAACAGCTACAGCACTTCGTAAACCGGGCGGTAGTCTCCCAGGAGCAGGTGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU51918 lncRNA upstream 5369 17577445 ~ 17577756 (+) True G41683
TU51876 lncRNA upstream 96443 17484653 ~ 17486682 (+) False G41649
TU51877 lncRNA upstream 96543 17484653 ~ 17486582 (+) False G41649
TU51874 lncRNA upstream 98609 17480579 ~ 17484516 (+) True G41649
TU51878 lncRNA upstream 99092 17482976 ~ 17484033 (+) False G41649
TU52002 lncRNA downstream 329469 17921170 ~ 17985309 (+) False G41740
TU52009 lncRNA downstream 338234 17929935 ~ 18013678 (+) True G41743
TU52003 lncRNA downstream 368025 17959726 ~ 17985309 (+) True G41740
TU52011 lncRNA downstream 412247 18003948 ~ 18005499 (+) False G41744
TU52012 lncRNA downstream 412247 18003948 ~ 18018513 (+) True G41744
AMCG00013031 mRNA upstream 19181 17562730 ~ 17563944 (+) True AMCG00013031
AMCG00013029 mRNA upstream 25776 17533845 ~ 17557349 (+) True AMCG00013029
AMCG00013032 mRNA upstream 65388 17509287 ~ 17517737 (+) True AMCG00013032
AMCG00013023 mRNA upstream 106369 17469606 ~ 17476756 (+) True AMCG00013023
AMCG00013016 mRNA upstream 826033 16747170 ~ 16757092 (+) True AMCG00013016
AMCG00013030 mRNA downstream 9677 17601378 ~ 17638696 (+) True AMCG00013030
AMCG00013035 mRNA downstream 65418 17657119 ~ 17688640 (+) True AMCG00013035
AMCG00013040 mRNA downstream 257055 17848756 ~ 17852896 (+) True AMCG00013040
AMCG00013041 mRNA downstream 274513 17866214 ~ 17889767 (+) True AMCG00013041
AMCG00013045 mRNA downstream 559751 18151452 ~ 18154122 (+) True AMCG00013045
TU51470 other upstream 1952498 15620785 ~ 15630627 (+) False AMCG00012982
TU51437 other upstream 2103759 15477179 ~ 15479366 (+) True G41264
TU51320 other upstream 2446396 15130795 ~ 15136729 (+) False AMCG00012954
TU51166 other upstream 2949712 14632357 ~ 14633413 (+) True G41059
TU51114 other upstream 3053319 14528162 ~ 14529806 (+) False AMCG00012940
TU52302 other downstream 1433860 19025561 ~ 19029278 (+) True G41978
TU52747 other downstream 3677974 21269675 ~ 21278728 (+) True G42326
TU52756 other downstream 3779142 21370843 ~ 21418787 (+) True AMCG00013126
TU52772 other downstream 3834959 21426660 ~ 21486808 (+) True G42344
TU52771 other downstream 3893206 21484907 ~ 21486808 (+) False G42344

Expression Profile