Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00013045 |
| length | 486 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 4 |
| gene id | AMCG00013045 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 18151452 ~ 18154122 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0030145 | manganese ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU52012 | lncRNA | upstream | 132939 | 18003948 ~ 18018513 (+) | True | G41744 |
| TU52009 | lncRNA | upstream | 137774 | 17929935 ~ 18013678 (+) | True | G41743 |
| TU52011 | lncRNA | upstream | 145953 | 18003948 ~ 18005499 (+) | False | G41744 |
| TU52002 | lncRNA | upstream | 166143 | 17921170 ~ 17985309 (+) | False | G41740 |
| TU52003 | lncRNA | upstream | 166143 | 17959726 ~ 17985309 (+) | True | G41740 |
| TU52085 | lncRNA | downstream | 39129 | 18193251 ~ 18195132 (+) | True | AMCG00013047 |
| TU52097 | lncRNA | downstream | 85870 | 18239992 ~ 18240369 (+) | True | G41810 |
| TU52100 | lncRNA | downstream | 86346 | 18240468 ~ 18242583 (+) | True | G41812 |
| TU52102 | lncRNA | downstream | 86346 | 18240468 ~ 18242548 (+) | False | G41812 |
| TU52101 | lncRNA | downstream | 86375 | 18240497 ~ 18242583 (+) | False | G41812 |
| AMCG00013041 | mRNA | upstream | 261685 | 17866214 ~ 17889767 (+) | True | AMCG00013041 |
| AMCG00013040 | mRNA | upstream | 298556 | 17848756 ~ 17852896 (+) | True | AMCG00013040 |
| AMCG00013035 | mRNA | upstream | 462812 | 17657119 ~ 17688640 (+) | True | AMCG00013035 |
| AMCG00013030 | mRNA | upstream | 512756 | 17601378 ~ 17638696 (+) | True | AMCG00013030 |
| AMCG00013033 | mRNA | upstream | 559751 | 17583125 ~ 17591701 (+) | True | AMCG00013033 |
| AMCG00013047 | mRNA | downstream | 4720 | 18158842 ~ 18230238 (+) | False | AMCG00013047 |
| AMCG00013046 | mRNA | downstream | 101323 | 18255445 ~ 18258332 (+) | True | AMCG00013046 |
| AMCG00013053 | mRNA | downstream | 112146 | 18266268 ~ 18280801 (+) | True | AMCG00013053 |
| AMCG00013052 | mRNA | downstream | 178603 | 18332725 ~ 18351553 (+) | True | AMCG00013052 |
| AMCG00013054 | mRNA | downstream | 205433 | 18359555 ~ 18362887 (+) | True | AMCG00013054 |
| TU51470 | other | upstream | 2520825 | 15620785 ~ 15630627 (+) | False | AMCG00012982 |
| TU51437 | other | upstream | 2672086 | 15477179 ~ 15479366 (+) | True | G41264 |
| TU51320 | other | upstream | 3014723 | 15130795 ~ 15136729 (+) | False | AMCG00012954 |
| TU51166 | other | upstream | 3518039 | 14632357 ~ 14633413 (+) | True | G41059 |
| TU51114 | other | upstream | 3621646 | 14528162 ~ 14529806 (+) | False | AMCG00012940 |
| TU52302 | other | downstream | 871439 | 19025561 ~ 19029278 (+) | True | G41978 |
| TU52747 | other | downstream | 3115553 | 21269675 ~ 21278728 (+) | True | G42326 |
| TU52756 | other | downstream | 3216721 | 21370843 ~ 21418787 (+) | True | AMCG00013126 |
| TU52772 | other | downstream | 3272538 | 21426660 ~ 21486808 (+) | True | G42344 |
| TU52771 | other | downstream | 3330785 | 21484907 ~ 21486808 (+) | False | G42344 |
