RNA id: AMCG00013046



Basic Information


Item Value
RNA id AMCG00013046
length 372
RNA type mRNA
GC content 0.58
exon number 3
gene id AMCG00013046
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 18255445 ~ 18258332 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGATTGGCTGTCGACCATCGCACCCGGTCTGTCTGGAGGGCGCTCGCCCTGCCTTCTGTTTGAAGGTGTTGGATGGCCAGTATGGCATGTACGTGTGGCCCTGTGCGGTAGTCCTGGCTCAGTATGTGTGGTGGCACTGGGAGGAGCTCAGAGGAAAGACTATCCTGGAGGTGCTTCTCTCAGACAGCGCGGAGCTGCCAAAGTGCCTGGAGAACTGCCAGCGAAGCTGTGAGGTCAATGGCCTGTCCTCCATCCCTGTCCTGGGGCTCACCTGGGGCAGGATCTCCCCCAACATGCTGCTCCTTCCCACACTCCACTTCATTCTCGGGTCGGATGTCTTCTATGAACCAGAAGGCAAGCCTCGCTTTTAA

Function


GO: NA

KEGG:

id description
K23151 METTL23; methyltransferase-like protein 23

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU52107 lncRNA upstream 11302 18242783 ~ 18244143 (+) True G41814
TU52100 lncRNA upstream 12862 18240468 ~ 18242583 (+) True G41812
TU52101 lncRNA upstream 12862 18240497 ~ 18242583 (+) False G41812
TU52102 lncRNA upstream 12897 18240468 ~ 18242548 (+) False G41812
TU52097 lncRNA upstream 15076 18239992 ~ 18240369 (+) True G41810
TU52112 lncRNA downstream 3631 18261963 ~ 18265695 (+) True G41818
TU52115 lncRNA downstream 25296 18283628 ~ 18284855 (+) True G41821
TU52116 lncRNA downstream 37313 18295645 ~ 18295946 (+) True G41822
TU52117 lncRNA downstream 40293 18298625 ~ 18298914 (+) True G41823
TU52226 lncRNA downstream 401922 18660254 ~ 18660522 (+) True G41908
AMCG00013047 mRNA upstream 25207 18158842 ~ 18230238 (+) False AMCG00013047
AMCG00013045 mRNA upstream 101323 18151452 ~ 18154122 (+) True AMCG00013045
AMCG00013041 mRNA upstream 365678 17866214 ~ 17889767 (+) True AMCG00013041
AMCG00013040 mRNA upstream 402549 17848756 ~ 17852896 (+) True AMCG00013040
AMCG00013035 mRNA upstream 566805 17657119 ~ 17688640 (+) True AMCG00013035
AMCG00013053 mRNA downstream 7936 18266268 ~ 18280801 (+) True AMCG00013053
AMCG00013052 mRNA downstream 74393 18332725 ~ 18351553 (+) True AMCG00013052
AMCG00013054 mRNA downstream 101223 18359555 ~ 18362887 (+) True AMCG00013054
AMCG00013057 mRNA downstream 130479 18388811 ~ 18396122 (+) True AMCG00013057
AMCG00013056 mRNA downstream 148379 18406711 ~ 18433678 (+) True AMCG00013056
TU51470 other upstream 2624818 15620785 ~ 15630627 (+) False AMCG00012982
TU51437 other upstream 2776079 15477179 ~ 15479366 (+) True G41264
TU51320 other upstream 3118716 15130795 ~ 15136729 (+) False AMCG00012954
TU51166 other upstream 3622032 14632357 ~ 14633413 (+) True G41059
TU51114 other upstream 3725639 14528162 ~ 14529806 (+) False AMCG00012940
TU52302 other downstream 767229 19025561 ~ 19029278 (+) True G41978
TU52747 other downstream 3011343 21269675 ~ 21278728 (+) True G42326
TU52756 other downstream 3112511 21370843 ~ 21418787 (+) True AMCG00013126
TU52772 other downstream 3168328 21426660 ~ 21486808 (+) True G42344
TU52771 other downstream 3226575 21484907 ~ 21486808 (+) False G42344

Expression Profile