Item | Value |
---|---|
RNA id | AMCG00013080 |
length | 4394 |
RNA type | mRNA |
GC content | 0.42 |
exon number | 18 |
gene id | AMCG00013080 |
representative | True |
Item | Value |
---|---|
chromosome id | CM030125.1 |
NCBI id | CM030125.1 |
chromosome length | 49972098 |
location | 19988861 ~ 20005821 (-) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU52419 | lncRNA | downstream | 1126 | 19986243 ~ 19987735 (-) | True | G42078 |
TU52393 | lncRNA | downstream | 212132 | 19776524 ~ 19776729 (-) | True | G42058 |
TU52391 | lncRNA | downstream | 304203 | 19684436 ~ 19684658 (-) | True | G42056 |
TU52245 | lncRNA | downstream | 1291254 | 18696820 ~ 18697607 (-) | True | G41925 |
TU52242 | lncRNA | downstream | 1328339 | 18660254 ~ 18660522 (-) | True | G41922 |
TU52493 | lncRNA | upstream | 395887 | 20401708 ~ 20405085 (-) | True | G42136 |
TU52621 | lncRNA | upstream | 660524 | 20666345 ~ 20674228 (-) | True | G42242 |
TU52672 | lncRNA | upstream | 883862 | 20889683 ~ 20890288 (-) | True | G42278 |
TU52673 | lncRNA | upstream | 883862 | 20889683 ~ 20890288 (-) | False | G42278 |
TU52824 | lncRNA | upstream | 1188328 | 21194149 ~ 21195350 (-) | True | G42376 |
AMCG00013077 | mRNA | downstream | 10706 | 19963530 ~ 19978155 (-) | True | AMCG00013077 |
AMCG00013078 | mRNA | downstream | 598740 | 19211843 ~ 19390121 (-) | True | AMCG00013078 |
AMCG00013075 | mRNA | downstream | 779857 | 19080736 ~ 19209004 (-) | True | AMCG00013075 |
AMCG00013070 | mRNA | downstream | 917489 | 19069196 ~ 19071372 (-) | False | AMCG00013070 |
AMCG00013069 | mRNA | downstream | 942815 | 19025572 ~ 19046046 (-) | True | AMCG00013069 |
AMCG00013083 | mRNA | upstream | 363325 | 20369146 ~ 20372204 (-) | True | AMCG00013083 |
AMCG00013085 | mRNA | upstream | 387833 | 20393654 ~ 20397861 (-) | True | AMCG00013085 |
AMCG00013084 | mRNA | upstream | 400736 | 20406557 ~ 20445394 (-) | True | AMCG00013084 |
AMCG00013090 | mRNA | upstream | 527762 | 20533583 ~ 20538805 (-) | False | AMCG00013090 |
AMCG00013095 | mRNA | upstream | 545046 | 20550867 ~ 20578477 (-) | True | AMCG00013095 |
TU52412 | other | downstream | 5981 | 19980336 ~ 19982880 (-) | True | G42076 |
TU52331 | other | downstream | 917443 | 19068245 ~ 19071418 (-) | True | AMCG00013070 |
TU52316 | other | downstream | 966083 | 18977060 ~ 19022778 (-) | False | AMCG00013071 |
TU52315 | other | downstream | 990095 | 18977060 ~ 18998766 (-) | True | AMCG00013071 |
TU52133 | other | downstream | 1744768 | 18242750 ~ 18244093 (-) | True | G41836 |
TU52536 | other | upstream | 525373 | 20531194 ~ 20545811 (-) | True | AMCG00013090 |
TU52810 | other | upstream | 1246286 | 21252107 ~ 21301421 (-) | True | G42366 |
TU52828 | other | upstream | 1300365 | 21306186 ~ 21307693 (-) | False | AMCG00013112 |
TU52819 | other | upstream | 1330396 | 21336217 ~ 21517177 (-) | True | G42371 |
TU52829 | other | upstream | 1331246 | 21337067 ~ 21375763 (-) | True | G42381 |
species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
---|---|---|---|---|---|---|---|---|
grasscarp (Ctenopharyngodon idella) | CI01000055_01796139_01801260.mRNA | False | 1907 | mRNA | 0.44 | 7 | CI01000055 | 1796139 ~ 1802186 (+) |