RNA id: AMCG00013095


Basic Information

Item Value
RNA id AMCG00013095
length 306
RNA type mRNA
GC content 0.55
exon number 4
gene id AMCG00013095
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 20550867 ~ 20578477 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTTGGCTTACCGCAATGGACAGTGCGATGCTCTGGATTCGAATCCCCAGGTCCCAGGGGGATTCGCAGTTGTACTGATCAGCAAGCTCTCCCTCTGCTGCGATGGCACGGATGTAGTCCTCGGCCAGACTGTCCACCTCTTCTACGCTGATATTCCTGCGAGACCTCCCCACTTTGTCATCGTCCAGGACCTCGATGGCCTGCATGTAATGGCTGCAGAGCTGACTCACACTGTGAAGCTCAACCTGAACTACAATAGCGCCGACAATTTTCCCGGCCGAGATCGAGATGACTGTCCCGTGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU52493 lncRNA downstream 145782 20401708 ~ 20405085 (-) True G42136
TU52419 lncRNA downstream 563132 19986243 ~ 19987735 (-) True G42078
TU52393 lncRNA downstream 774138 19776524 ~ 19776729 (-) True G42058
TU52391 lncRNA downstream 866209 19684436 ~ 19684658 (-) True G42056
TU52245 lncRNA downstream 1853260 18696820 ~ 18697607 (-) True G41925
TU52621 lncRNA upstream 87868 20666345 ~ 20674228 (-) True G42242
TU52672 lncRNA upstream 311206 20889683 ~ 20890288 (-) True G42278
TU52673 lncRNA upstream 311206 20889683 ~ 20890288 (-) False G42278
TU52824 lncRNA upstream 615672 21194149 ~ 21195350 (-) True G42376
TU52826 lncRNA upstream 630788 21209265 ~ 21209649 (-) True G42378
AMCG00013090 mRNA downstream 12062 20533583 ~ 20538805 (-) False AMCG00013090
AMCG00013084 mRNA downstream 105473 20406557 ~ 20445394 (-) True AMCG00013084
AMCG00013085 mRNA downstream 153006 20393654 ~ 20397861 (-) True AMCG00013085
AMCG00013083 mRNA downstream 178663 20369146 ~ 20372204 (-) True AMCG00013083
AMCG00013080 mRNA downstream 545046 19988861 ~ 20005821 (-) True AMCG00013080
AMCG00013094 mRNA upstream 68136 20646613 ~ 20680608 (-) True AMCG00013094
AMCG00013096 mRNA upstream 106794 20685271 ~ 20734269 (-) True AMCG00013096
AMCG00013097 mRNA upstream 169012 20747489 ~ 20760002 (-) True AMCG00013097
AMCG00013103 mRNA upstream 263141 20841618 ~ 20854064 (-) True AMCG00013103
AMCG00013102 mRNA upstream 405559 20984036 ~ 20985885 (-) True AMCG00013102
TU52536 other downstream 5056 20531194 ~ 20545811 (-) True AMCG00013090
TU52412 other downstream 567987 19980336 ~ 19982880 (-) True G42076
TU52331 other downstream 1479449 19068245 ~ 19071418 (-) True AMCG00013070
TU52316 other downstream 1528089 18977060 ~ 19022778 (-) False AMCG00013071
TU52315 other downstream 1552101 18977060 ~ 18998766 (-) True AMCG00013071
TU52810 other upstream 673630 21252107 ~ 21301421 (-) True G42366
TU52828 other upstream 727709 21306186 ~ 21307693 (-) False AMCG00013112
TU52819 other upstream 757740 21336217 ~ 21517177 (-) True G42371
TU52829 other upstream 758590 21337067 ~ 21375763 (-) True G42381
TU52823 other upstream 772183 21350660 ~ 21360107 (-) True G42375