Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00013101 |
| length | 1086 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 2 |
| gene id | AMCG00013101 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 20817521 ~ 20830999 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0008146 | sulfotransferase activity | molecular_function |
| id | description |
|---|---|
| K07809 | HS3ST3; [heparan sulfate]-glucosamine 3-sulfotransferase 3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU52549 | lncRNA | upstream | 190187 | 20627094 ~ 20627334 (+) | True | G42177 |
| TU52537 | lncRNA | upstream | 265704 | 20551260 ~ 20551817 (+) | True | G42172 |
| TU52478 | lncRNA | upstream | 424912 | 20387684 ~ 20392609 (+) | True | G42127 |
| TU52418 | lncRNA | upstream | 829661 | 19986178 ~ 19987860 (+) | True | G42077 |
| TU52389 | lncRNA | upstream | 1230728 | 19586528 ~ 19586793 (+) | True | G42054 |
| TU52658 | lncRNA | downstream | 8590 | 20839589 ~ 20840560 (+) | True | G42269 |
| TU52670 | lncRNA | downstream | 58676 | 20889675 ~ 20890332 (+) | True | G42277 |
| TU52751 | lncRNA | downstream | 425586 | 21256585 ~ 21259588 (+) | True | G42330 |
| TU52752 | lncRNA | downstream | 425586 | 21256585 ~ 21304213 (+) | False | G42330 |
| TU52762 | lncRNA | downstream | 469609 | 21300608 ~ 21471560 (+) | False | AMCG00013118 |
| AMCG00013098 | mRNA | upstream | 42220 | 20773228 ~ 20775301 (+) | True | AMCG00013098 |
| AMCG00013099 | mRNA | upstream | 48928 | 20760866 ~ 20768593 (+) | True | AMCG00013099 |
| AMCG00013091 | mRNA | upstream | 167258 | 20641692 ~ 20650263 (+) | True | AMCG00013091 |
| AMCG00013093 | mRNA | upstream | 192223 | 20567147 ~ 20625298 (+) | True | AMCG00013093 |
| AMCG00013092 | mRNA | upstream | 252177 | 20558228 ~ 20565344 (+) | True | AMCG00013092 |
| AMCG00013100 | mRNA | downstream | 129422 | 20960421 ~ 20980242 (+) | True | AMCG00013100 |
| AMCG00013104 | mRNA | downstream | 157854 | 20988853 ~ 20999310 (+) | True | AMCG00013104 |
| AMCG00013105 | mRNA | downstream | 198566 | 21029565 ~ 21075759 (+) | True | AMCG00013105 |
| AMCG00013107 | mRNA | downstream | 354747 | 21185746 ~ 21216078 (+) | True | AMCG00013107 |
| AMCG00013109 | mRNA | downstream | 434191 | 21265190 ~ 21269791 (+) | True | AMCG00013109 |
| TU52302 | other | upstream | 1788243 | 19025561 ~ 19029278 (+) | True | G41978 |
| TU51470 | other | upstream | 5186894 | 15620785 ~ 15630627 (+) | False | AMCG00012982 |
| TU51437 | other | upstream | 5338155 | 15477179 ~ 15479366 (+) | True | G41264 |
| TU51320 | other | upstream | 5680792 | 15130795 ~ 15136729 (+) | False | AMCG00012954 |
| TU51166 | other | upstream | 6184108 | 14632357 ~ 14633413 (+) | True | G41059 |
| TU52747 | other | downstream | 438676 | 21269675 ~ 21278728 (+) | True | G42326 |
| TU52756 | other | downstream | 539844 | 21370843 ~ 21418787 (+) | True | AMCG00013126 |
| TU52772 | other | downstream | 595661 | 21426660 ~ 21486808 (+) | True | G42344 |
| TU52771 | other | downstream | 653908 | 21484907 ~ 21486808 (+) | False | G42344 |
| TU52773 | other | downstream | 654322 | 21485321 ~ 21486808 (+) | False | G42344 |
