RNA id: AMCG00013116


Basic Information

Item Value
RNA id AMCG00013116
length 279
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00013116
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21350459 ~ 21350814 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATGGCTGAGGAGCTGAAGAAGGAGCAGGACACCAGCTCTCACCTGGAGAGAATGAAGAAGAACCTGGAGGTCACAGTGAAGGACCTGCAGCACCGTCTGGATGAGGCTGAGCAGCTGGCAATGAAGGGTGGAAAGAAGCAGCTCCAGAAACTAGAGTCTAGGGTCCGTGAGCTGGAGAATGAGTTTGAAGCTGAACAAAAACGTGGAGCTGAAGCCATTAAAGGAGTCCGTAAATATGAGAGAAGAGTCAAGGAGCTCTCCTACCAGGTAATATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU52831 lncRNA downstream 3625 21346475 ~ 21346834 (-) True G42383
TU52820 lncRNA downstream 40111 21287320 ~ 21310348 (-) True G42372
TU52826 lncRNA downstream 140810 21209265 ~ 21209649 (-) True G42378
TU52824 lncRNA downstream 155109 21194149 ~ 21195350 (-) True G42376
TU52672 lncRNA downstream 460171 20889683 ~ 20890288 (-) True G42278
TU52834 lncRNA upstream 48830 21399644 ~ 21400158 (-) True G42386
TU52822 lncRNA upstream 98078 21448892 ~ 21449281 (-) False AMCG00013131
TU52907 lncRNA upstream 542810 21893624 ~ 21905597 (-) True G42440
TU52919 lncRNA upstream 798767 22149581 ~ 22149792 (-) True G42450
TU53044 lncRNA upstream 1223744 22574558 ~ 22574827 (-) True G42544
AMCG00013110 mRNA downstream 12376 21336157 ~ 21338083 (-) True AMCG00013110
AMCG00013113 mRNA downstream 15328 21328200 ~ 21335131 (-) True AMCG00013113
AMCG00013112 mRNA downstream 39153 21300093 ~ 21311306 (-) True AMCG00013112
AMCG00013111 mRNA downstream 61390 21287146 ~ 21289069 (-) True AMCG00013111
AMCG00013117 mRNA downstream 71797 21270349 ~ 21278662 (-) True AMCG00013117
AMCG00013115 mRNA upstream 449 21351263 ~ 21375164 (-) True AMCG00013115
AMCG00013138 mRNA upstream 43462 21394276 ~ 21398255 (-) True AMCG00013138
AMCG00013137 mRNA upstream 61552 21412366 ~ 21422118 (-) True AMCG00013137
AMCG00013131 mRNA upstream 97515 21448329 ~ 21449954 (-) True AMCG00013131
AMCG00013136 mRNA upstream 101218 21452032 ~ 21454895 (-) True AMCG00013136
TU52828 other downstream 42766 21306186 ~ 21307693 (-) False AMCG00013112
TU52810 other downstream 49038 21252107 ~ 21301421 (-) True G42366
TU52536 other downstream 804648 20531194 ~ 20545811 (-) True AMCG00013090
TU52412 other downstream 1367579 19980336 ~ 19982880 (-) True G42076
TU52331 other downstream 2279041 19068245 ~ 19071418 (-) True AMCG00013070
TU52821 other upstream 61125 21411939 ~ 21414964 (-) False AMCG00013137
TU52837 other upstream 161270 21512084 ~ 21514693 (-) False AMCG00013133
TU53293 other upstream 2493269 23844083 ~ 23847477 (-) True G42749
TU53481 other upstream 3531305 24882119 ~ 24902428 (-) True AMCG00013204
TU53519 other upstream 3675062 25025876 ~ 25029004 (-) False AMCG00013216

Expression Profile