RNA id: AMCG00013125


Basic Information

Item Value
RNA id AMCG00013125
length 363
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00013125
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21486231 ~ 21486693 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGTACGGACGCGGAGATGGCCGTTTTTGGCCCGGCTGCCATATACCTGAGGAAGCCTGAGAAGGAGAGGATTGAGGCTCAGAACAAGCCCTTTGATGCCAAAACTGCCTGCTACGTGATTGATGCCAAGGAGCTGTATGTCAAAGGTGTCATCCAGAGTAAAGAAGGGGGCAAAGCCACTGTCAAGAATGAGAAGGGGGAGACTCTAACAGTCAAGGAGGACGATGTCCACCCAATGAATCCTCCCAAGTACGACAAAATTGAGGACATGGCGATGATGACCCACCTGAACGAGCCCGCTGTGCTGTTTAACCTTAAAGAGCGTTACGCAGCATGGATGATCTACGTAAgagaacattaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU52762 lncRNA upstream 14671 21300608 ~ 21471560 (+) False AMCG00013118
TU52753 lncRNA upstream 74242 21364104 ~ 21411989 (+) True G42331
TU52752 lncRNA upstream 182018 21256585 ~ 21304213 (+) False G42330
TU52751 lncRNA upstream 226643 21256585 ~ 21259588 (+) True G42330
TU52670 lncRNA upstream 595899 20889675 ~ 20890332 (+) True G42277
TU52776 lncRNA downstream 12280 21498973 ~ 21503924 (+) True G42347
TU52783 lncRNA downstream 42088 21528781 ~ 21600968 (+) True G42350
TU52917 lncRNA downstream 661601 22148294 ~ 22148513 (+) True G42448
TU52918 lncRNA downstream 662892 22149585 ~ 22149787 (+) True G42449
TU52926 lncRNA downstream 770813 22257506 ~ 22259912 (+) False AMCG00013147
AMCG00013120 mRNA upstream 4951 21475618 ~ 21481280 (+) True AMCG00013120
AMCG00013140 mRNA upstream 4951 21476260 ~ 21481280 (+) True AMCG00013140
AMCG00013124 mRNA upstream 37513 21421622 ~ 21448718 (+) True AMCG00013124
AMCG00013126 mRNA upstream 64915 21416485 ~ 21421316 (+) False AMCG00013126
AMCG00013119 mRNA upstream 85919 21399406 ~ 21400312 (+) True AMCG00013119
AMCG00013127 mRNA downstream 58926 21545619 ~ 21547056 (+) True AMCG00013127
AMCG00013129 mRNA downstream 64479 21551172 ~ 21585017 (+) True AMCG00013129
AMCG00013146 mRNA downstream 286549 21773242 ~ 21911741 (+) True AMCG00013146
AMCG00013148 mRNA downstream 443362 21930055 ~ 22228496 (+) True AMCG00013148
AMCG00013147 mRNA downstream 761804 22248497 ~ 22260816 (+) True AMCG00013147
TU52756 other upstream 67444 21370843 ~ 21418787 (+) True AMCG00013126
TU52747 other upstream 207503 21269675 ~ 21278728 (+) True G42326
TU52302 other upstream 2456953 19025561 ~ 19029278 (+) True G41978
TU51470 other upstream 5855604 15620785 ~ 15630627 (+) False AMCG00012982
TU51437 other upstream 6006865 15477179 ~ 15479366 (+) True G41264
TU52922 other downstream 755736 22242429 ~ 22245790 (+) True G42453
TU53407 other downstream 3260799 24747492 ~ 24749395 (+) True G42846
TU53419 other downstream 3281731 24768424 ~ 24770148 (+) True G42858
TU53706 other downstream 4033474 25520167 ~ 25521681 (+) False AMCG00013236
TU53847 other downstream 4768286 26254979 ~ 26257842 (+) False AMCG00013255