RNA id: AMCG00013126



Basic Information


Item Value
RNA id AMCG00013126
length 540
RNA type mRNA
GC content 0.46
exon number 4
gene id AMCG00013126
representative False

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 21370843 ~ 21421316 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTGTCCTCTTGTCACAACACAGGAGAACTTGGGCAAGCTGATGAGCAACTTGAGGAGCACACATCCTCACTTTGTGCGCTGCTTGATTCCCAATGAATCAAAGACACCAGGTACTGTCAACATCCAACATATTTCATACCTGAGTACACTGTTATACAAAGTATTGAATGCCAGTGCCATTCCAGAGGGTCAGTTCATTGACAGCAAGAAATGTTCAGAGAAGCTCTTGGGATCCATTGATGTAGACCACACCCAGTATAAATTTGGACACACTAAGgtgttttttaaagctgGTCTGCTGGGTACCCTTGAGGAGATGCGAGATGAAAAACTGGCCGCGCTCATCACTAACACGCAGGCTCTTTGCCGTGGCTTCGTCATGAGAAAGGAATTTGTGAAGATGATGGAAAGGAGCTTCCTCAGCCTGTCTCTTGTAAGCCTTCACTTTGAGCTGCAGCTTGTCAACCAGATCCTGGAGTCTGTTCACATTCTTCTTGTCCTCCTCAGCCTGCAGAGACAACAGATGACACATACTTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU52753 lncRNA upstream 4496 21364104 ~ 21411989 (+) True G42331
TU52752 lncRNA upstream 112272 21256585 ~ 21304213 (+) False G42330
TU52751 lncRNA upstream 156897 21256585 ~ 21259588 (+) True G42330
TU52670 lncRNA upstream 526153 20889675 ~ 20890332 (+) True G42277
TU52658 lncRNA upstream 575925 20839589 ~ 20840560 (+) True G42269
TU52774 lncRNA downstream 51400 21472716 ~ 21508824 (+) True G42345
TU52776 lncRNA downstream 77657 21498973 ~ 21503924 (+) True G42347
TU52783 lncRNA downstream 107465 21528781 ~ 21600968 (+) True G42350
TU52917 lncRNA downstream 726978 22148294 ~ 22148513 (+) True G42448
TU52918 lncRNA downstream 728269 22149585 ~ 22149787 (+) True G42449
AMCG00013119 mRNA upstream 16173 21399406 ~ 21400312 (+) True AMCG00013119
AMCG00013128 mRNA upstream 53572 21362315 ~ 21362913 (+) True AMCG00013128
AMCG00013121 mRNA upstream 56778 21350662 ~ 21359707 (+) True AMCG00013121
AMCG00013123 mRNA upstream 71422 21343864 ~ 21345063 (+) True AMCG00013123
AMCG00013122 mRNA upstream 72758 21341010 ~ 21343727 (+) True AMCG00013122
AMCG00013124 mRNA downstream 306 21421622 ~ 21448718 (+) True AMCG00013124
AMCG00013120 mRNA downstream 54302 21475618 ~ 21481280 (+) True AMCG00013120
AMCG00013140 mRNA downstream 54944 21476260 ~ 21481280 (+) True AMCG00013140
AMCG00013142 mRNA downstream 64915 21486231 ~ 21486678 (+) True AMCG00013142
AMCG00013125 mRNA downstream 64915 21486231 ~ 21486693 (+) True AMCG00013125
TU52747 other upstream 137757 21269675 ~ 21278728 (+) True G42326
TU52302 other upstream 2387207 19025561 ~ 19029278 (+) True G41978
TU51470 other upstream 5785858 15620785 ~ 15630627 (+) False AMCG00012982
TU51437 other upstream 5937119 15477179 ~ 15479366 (+) True G41264
TU51320 other upstream 6279756 15130795 ~ 15136729 (+) False AMCG00012954
TU52772 other downstream 5344 21426660 ~ 21486808 (+) True G42344
TU52771 other downstream 63591 21484907 ~ 21486808 (+) False G42344
TU52773 other downstream 64005 21485321 ~ 21486808 (+) False G42344
TU52922 other downstream 821113 22242429 ~ 22245790 (+) True G42453
TU53407 other downstream 3326176 24747492 ~ 24749395 (+) True G42846

Expression Profile