RNA id: AMCG00013157


Basic Information

Item Value
RNA id AMCG00013157
length 285
RNA type mRNA
GC content 0.53
exon number 1
gene id AMCG00013157
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 22571776 ~ 22572060 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGTTTTATCTTGAAATCGACCCTGTAACGCTGAATCTCATCATCCTGGTGGCCAGCTATGTTATCTTGCTCCTAGTATTTCTGATATCGTGTGTGCTGTATGACTGTCGGGGCAAAGATCCCAGTAAGGAATATGCCCCTGAGCCCGCCCCGGCCACCCAGTCCCCCATCAGACTGGTAGTGATGCAGAGCTCTCCTGCAACGGCTCGATGGGGTGAGAAGATAGTGACGACGTATGAGGCACCGACCGACCTGCGGGAGAAGAGAAGTACTTTGGTCTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU52919 lncRNA downstream 421984 22149581 ~ 22149792 (-) True G42450
TU52907 lncRNA downstream 666179 21893624 ~ 21905597 (-) True G42440
TU52822 lncRNA downstream 1122495 21448892 ~ 21449281 (-) False AMCG00013131
TU52834 lncRNA downstream 1171618 21399644 ~ 21400158 (-) True G42386
TU52831 lncRNA downstream 1224942 21346475 ~ 21346834 (-) True G42383
TU53044 lncRNA upstream 2498 22574558 ~ 22574827 (-) True G42544
TU53058 lncRNA upstream 134006 22706066 ~ 22706337 (-) True G42553
TU53062 lncRNA upstream 244096 22816156 ~ 22816369 (-) True G42557
TU53237 lncRNA upstream 1206865 23778925 ~ 23779350 (-) True G42704
TU53286 lncRNA upstream 1255986 23828046 ~ 23839146 (-) False AMCG00013184
AMCG00013156 mRNA downstream 22269 22537159 ~ 22549507 (-) True AMCG00013156
AMCG00013153 mRNA downstream 196416 22370865 ~ 22375360 (-) True AMCG00013153
AMCG00013151 mRNA downstream 204766 22319662 ~ 22367010 (-) True AMCG00013151
AMCG00013150 mRNA downstream 259019 22293328 ~ 22312757 (-) True AMCG00013150
AMCG00013145 mRNA downstream 532542 22023976 ~ 22039234 (-) True AMCG00013145
AMCG00013160 mRNA upstream 38542 22610602 ~ 22631301 (-) True AMCG00013160
AMCG00013159 mRNA upstream 72743 22644803 ~ 22645207 (-) True AMCG00013159
AMCG00013163 mRNA upstream 347238 22919298 ~ 22928441 (-) True AMCG00013163
AMCG00013164 mRNA upstream 357689 22929749 ~ 22937784 (-) True AMCG00013164
AMCG00013170 mRNA upstream 900473 23472533 ~ 23483799 (-) True AMCG00013170
TU52819 other downstream 1054599 21336217 ~ 21517177 (-) True G42371
TU52837 other downstream 1057083 21512084 ~ 21514693 (-) False AMCG00013133
TU52821 other downstream 1156812 21411939 ~ 21414964 (-) False AMCG00013137
TU52829 other downstream 1196013 21337067 ~ 21375763 (-) True G42381
TU52823 other downstream 1211669 21350660 ~ 21360107 (-) True G42375
TU53293 other upstream 1272023 23844083 ~ 23847477 (-) True G42749
TU53481 other upstream 2310059 24882119 ~ 24902428 (-) True AMCG00013204
TU53519 other upstream 2453816 25025876 ~ 25029004 (-) False AMCG00013216
TU53623 other upstream 2503333 25075393 ~ 25078244 (-) True G43001
TU53641 other upstream 2591923 25163983 ~ 25166758 (-) False AMCG00013223

Expression Profile