Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00013175 |
| length | 1256 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 9 |
| gene id | AMCG00013175 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 23736663 ~ 23740597 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016491 | oxidoreductase activity | molecular_function |
| id | description |
|---|---|
| K03331 | DCXR; L-xylulose reductase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU53136 | lncRNA | upstream | 176003 | 23554672 ~ 23560660 (+) | True | G42619 |
| TU53059 | lncRNA | upstream | 873681 | 22861815 ~ 22862982 (+) | True | G42554 |
| TU53014 | lncRNA | upstream | 1044447 | 22691932 ~ 22692216 (+) | True | G42518 |
| TU52982 | lncRNA | upstream | 1166582 | 22514864 ~ 22570081 (+) | True | G42488 |
| TU52945 | lncRNA | upstream | 1431921 | 22300573 ~ 22304742 (+) | True | G42464 |
| TU53241 | lncRNA | downstream | 43811 | 23784408 ~ 23831400 (+) | True | G42705 |
| TU53336 | lncRNA | downstream | 257197 | 23997794 ~ 24003887 (+) | True | G42779 |
| TU53337 | lncRNA | downstream | 266756 | 24007353 ~ 24007850 (+) | True | G42780 |
| TU53360 | lncRNA | downstream | 500672 | 24241269 ~ 24331854 (+) | False | AMCG00013198 |
| TU53362 | lncRNA | downstream | 524634 | 24265231 ~ 24331854 (+) | False | AMCG00013198 |
| AMCG00013174 | mRNA | upstream | 1359 | 23722157 ~ 23735304 (+) | True | AMCG00013174 |
| AMCG00013179 | mRNA | upstream | 46493 | 23688818 ~ 23690170 (+) | True | AMCG00013179 |
| AMCG00013173 | mRNA | upstream | 54838 | 23653499 ~ 23681825 (+) | True | AMCG00013173 |
| AMCG00013172 | mRNA | upstream | 85510 | 23618137 ~ 23651153 (+) | True | AMCG00013172 |
| AMCG00013171 | mRNA | upstream | 125832 | 23581711 ~ 23610831 (+) | True | AMCG00013171 |
| AMCG00013183 | mRNA | downstream | 35349 | 23775946 ~ 23802064 (+) | True | AMCG00013183 |
| AMCG00013182 | mRNA | downstream | 67646 | 23808243 ~ 23825285 (+) | True | AMCG00013182 |
| AMCG00013180 | mRNA | downstream | 99997 | 23840594 ~ 23847430 (+) | True | AMCG00013180 |
| AMCG00013181 | mRNA | downstream | 108578 | 23849175 ~ 23864196 (+) | True | AMCG00013181 |
| AMCG00013186 | mRNA | downstream | 146987 | 23887584 ~ 23901607 (+) | True | AMCG00013186 |
| TU52922 | other | upstream | 1490873 | 22242429 ~ 22245790 (+) | True | G42453 |
| TU52772 | other | upstream | 2249855 | 21426660 ~ 21486808 (+) | True | G42344 |
| TU52771 | other | upstream | 2249855 | 21484907 ~ 21486808 (+) | False | G42344 |
| TU52773 | other | upstream | 2249855 | 21485321 ~ 21486808 (+) | False | G42344 |
| TU52756 | other | upstream | 2317876 | 21370843 ~ 21418787 (+) | True | AMCG00013126 |
| TU53407 | other | downstream | 1006895 | 24747492 ~ 24749395 (+) | True | G42846 |
| TU53419 | other | downstream | 1027827 | 24768424 ~ 24770148 (+) | True | G42858 |
| TU53706 | other | downstream | 1779570 | 25520167 ~ 25521681 (+) | False | AMCG00013236 |
| TU53847 | other | downstream | 2514382 | 26254979 ~ 26257842 (+) | False | AMCG00013255 |
| TU53939 | other | downstream | 2784229 | 26524826 ~ 26540049 (+) | True | G43263 |
