RNA id: AMCG00013191



Basic Information


Item Value
RNA id AMCG00013191
length 705
RNA type mRNA
GC content 0.56
exon number 3
gene id AMCG00013191
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 23917200 ~ 23927578 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTTGGGGCGACAGCTCGGCAGCAGGCTGGCTATAGCAGCCCTCGCCACACCGCTCTTCTGCTTCATGGCAGGAAGCAGGCTGCAGCTGCTGGGAGACTCTCAGGGGAGACACCTAGAGGAGTCCAGGACTGATTACCTGCCGACGCAGCAGGACATCTTGCTGGCGCGGAAGCCCACCAAGGGGATCCACGAGTACGACTTTGAGATAAAGAACGTACCCTTCAAGATGGTGGACGTGGGGGGCCAGCGGTCGGAGCGCCGGCGATGGTTCGAGTGCTTTGACAGTGTCACCTCCATCCTCTTTCTCGTCTCGTCCAGCGAGTTCGACCAGGTGCTGATGGAGGACCGGCAGACCAATCGGCTCATGGAGTCCCTCAACATCTTCGAGACGATCGTCAACAACCGCGTCTTCAGCAACGTCTCAATCATTCTCTTCCTCAACAAGACAGACTTGCTGGAGGAGAAGGTGAAAACTGTGGCCATCAAGGACTATTTCCCCGATTACGAGGGGGAGCCGCACAACCTAAACGACGTGCAGAAGTTCCTGGTGGAATGTTTCCGCAACAAGCGCCGGGACCAGCAGCACAAGCCCCTGTACCATCACTTCACCACGGCCATTAACACAGAGAACATTCGACTGGTTTTCCGCGACGTCAAGGACACCATCCTTCACGACAACCTTAAACAGCTCATGTTACAGTGA

Function


GO: NA

KEGG:

id description
K04639 GNA13; guanine nucleotide-binding protein subunit alpha-13

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU53312 lncRNA downstream 176 23912791 ~ 23917024 (-) True G42760
TU53287 lncRNA downstream 15280 23901443 ~ 23901920 (-) True G42743
TU53294 lncRNA downstream 69723 23845405 ~ 23847477 (-) False G42749
TU53286 lncRNA downstream 78054 23828046 ~ 23839146 (-) False AMCG00013184
TU53237 lncRNA downstream 137850 23778925 ~ 23779350 (-) True G42704
TU53359 lncRNA upstream 293073 24220651 ~ 24222738 (-) True G42800
TU53483 lncRNA upstream 952063 24879641 ~ 24882055 (-) False AMCG00013204
TU53601 lncRNA upstream 1117800 25045378 ~ 25051849 (-) True G42993
TU53604 lncRNA upstream 1151960 25079538 ~ 25082029 (-) False G42993
TU53605 lncRNA upstream 1151960 25079538 ~ 25082029 (-) False G42993
AMCG00013190 mRNA downstream 4884 23902918 ~ 23912316 (-) True AMCG00013190
AMCG00013185 mRNA downstream 34932 23866640 ~ 23882268 (-) True AMCG00013185
AMCG00013184 mRNA downstream 78103 23826609 ~ 23839097 (-) True AMCG00013184
AMCG00013176 mRNA downstream 144167 23758274 ~ 23773033 (-) True AMCG00013176
AMCG00013178 mRNA downstream 160599 23744746 ~ 23756601 (-) True AMCG00013178
AMCG00013189 mRNA upstream 14133 23941711 ~ 23948688 (-) True AMCG00013189
AMCG00013192 mRNA upstream 57549 23985127 ~ 23995256 (-) True AMCG00013192
AMCG00013193 mRNA upstream 75148 24002726 ~ 24003841 (-) True AMCG00013193
AMCG00013194 mRNA upstream 94799 24022377 ~ 24023420 (-) True AMCG00013194
AMCG00013199 mRNA upstream 476760 24404338 ~ 24408807 (-) True AMCG00013199
TU53293 other downstream 69723 23844083 ~ 23847477 (-) True G42749
TU52837 other downstream 2402507 21512084 ~ 21514693 (-) False AMCG00013133
TU52821 other downstream 2502236 21411939 ~ 21414964 (-) False AMCG00013137
TU52829 other downstream 2541437 21337067 ~ 21375763 (-) True G42381
TU53481 other upstream 954541 24882119 ~ 24902428 (-) True AMCG00013204
TU53519 other upstream 1098298 25025876 ~ 25029004 (-) False AMCG00013216
TU53623 other upstream 1147815 25075393 ~ 25078244 (-) True G43001
TU53641 other upstream 1236405 25163983 ~ 25166758 (-) False AMCG00013223
TU53711 other upstream 1588502 25516080 ~ 25516963 (-) True G43070

Expression Profile



Homologous


species RNA id representative length rna type GC content exon number chromosome id location
zebrafish (Danio rerio) TCONS_00051822 True 1574 mRNA 0.50 4 NC_007114.7 36332579 ~ 36364903 (-)