Item | Value |
---|---|
RNA id | TU53362 |
length | 1320 |
lncRNA type | sense_over |
GC content | 0.36 |
exon number | 4 |
gene id | AMCG00013198 |
representative | False |
Item | Value |
---|---|
chromosome id | CM030125.1 |
NCBI id | CM030125.1 |
chromosome length | 49972098 |
location | 24241269 ~ 24331854 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU53337 | lncRNA | upstream | 257381 | 24007353 ~ 24007850 (+) | True | G42780 |
TU53336 | lncRNA | upstream | 261344 | 23997794 ~ 24003887 (+) | True | G42779 |
TU53241 | lncRNA | upstream | 433831 | 23784408 ~ 23831400 (+) | True | G42705 |
TU53136 | lncRNA | upstream | 704571 | 23554672 ~ 23560660 (+) | True | G42619 |
TU53059 | lncRNA | upstream | 1402249 | 22861815 ~ 22862982 (+) | True | G42554 |
TU53377 | lncRNA | downstream | 78988 | 24410842 ~ 24411044 (+) | True | G42816 |
TU53406 | lncRNA | downstream | 413669 | 24745523 ~ 24745754 (+) | True | G42845 |
TU53408 | lncRNA | downstream | 417838 | 24749692 ~ 24750256 (+) | True | G42847 |
TU53409 | lncRNA | downstream | 418454 | 24750308 ~ 24750565 (+) | True | G42848 |
TU53410 | lncRNA | downstream | 418953 | 24750807 ~ 24751467 (+) | True | G42849 |
AMCG00013196 | mRNA | upstream | 44512 | 24216510 ~ 24220719 (+) | True | AMCG00013196 |
AMCG00013197 | mRNA | upstream | 72749 | 24124906 ~ 24192482 (+) | True | AMCG00013197 |
AMCG00013195 | mRNA | upstream | 148973 | 24022831 ~ 24116258 (+) | True | AMCG00013195 |
AMCG00013187 | mRNA | upstream | 280806 | 23973082 ~ 23984425 (+) | True | AMCG00013187 |
AMCG00013188 | mRNA | upstream | 303274 | 23952046 ~ 23961957 (+) | True | AMCG00013188 |
AMCG00013200 | mRNA | downstream | 442944 | 24774798 ~ 24777606 (+) | True | AMCG00013200 |
AMCG00013203 | mRNA | downstream | 456771 | 24788625 ~ 24793416 (+) | True | AMCG00013203 |
AMCG00013202 | mRNA | downstream | 466473 | 24798327 ~ 24799733 (+) | True | AMCG00013202 |
AMCG00013209 | mRNA | downstream | 623117 | 24954971 ~ 24957583 (+) | True | AMCG00013209 |
AMCG00013215 | mRNA | downstream | 641863 | 24973717 ~ 24991262 (+) | True | AMCG00013215 |
TU52922 | other | upstream | 2019441 | 22242429 ~ 22245790 (+) | True | G42453 |
TU52772 | other | upstream | 2778423 | 21426660 ~ 21486808 (+) | True | G42344 |
TU52771 | other | upstream | 2778423 | 21484907 ~ 21486808 (+) | False | G42344 |
TU52773 | other | upstream | 2778423 | 21485321 ~ 21486808 (+) | False | G42344 |
TU52756 | other | upstream | 2846444 | 21370843 ~ 21418787 (+) | True | AMCG00013126 |
TU53407 | other | downstream | 415638 | 24747492 ~ 24749395 (+) | True | G42846 |
TU53419 | other | downstream | 436570 | 24768424 ~ 24770148 (+) | True | G42858 |
TU53706 | other | downstream | 1188313 | 25520167 ~ 25521681 (+) | False | AMCG00013236 |
TU53847 | other | downstream | 1923125 | 26254979 ~ 26257842 (+) | False | AMCG00013255 |
TU53939 | other | downstream | 2192972 | 26524826 ~ 26540049 (+) | True | G43263 |