RNA id: AMCG00013231



Basic Information


Item Value
RNA id AMCG00013231
length 261
RNA type mRNA
GC content 0.52
exon number 2
gene id AMCG00013231
representative True

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 25357317 ~ 25366546 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGATCTGTGCAACCTGCCCTTTCCTCAAGTCATATGATGTAACAGACTGCTTTAAAGACAAACGAGAACCCACCCCTACACCAAAACCAGCAGACTTACCGGCCGGCATCATCATGAATGCACTGCTTTGGTCGACGTCCTCTTGGGTTGTCAAGACCACGGACAGCAGCATGAGGCTGGCATCACTTCCAGGGTCAGCAACACAGACAGGGATGTGGAAATTTCCAGAGTGCCGCATTGCTGGCACACCCCATGGCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU53533 lncRNA upstream 237509 25089170 ~ 25119808 (+) False G42950
TU53535 lncRNA upstream 265599 25089170 ~ 25091718 (+) False G42950
TU53500 lncRNA upstream 340951 24991455 ~ 25016366 (+) True G42925
TU53494 lncRNA upstream 430572 24924791 ~ 24926745 (+) True G42922
TU53473 lncRNA upstream 475259 24879764 ~ 24882058 (+) True G42906
TU53701 lncRNA downstream 141645 25508191 ~ 25511347 (+) True G43062
TU53704 lncRNA downstream 145662 25512208 ~ 25512901 (+) True G43063
TU53705 lncRNA downstream 155932 25522478 ~ 25524992 (+) True G43064
TU53719 lncRNA downstream 221933 25588479 ~ 25592334 (+) True G43078
TU53720 lncRNA downstream 227825 25594371 ~ 25594607 (+) True G43079
AMCG00013228 mRNA upstream 5579 25331132 ~ 25351738 (+) True AMCG00013228
AMCG00013230 mRNA upstream 32877 25319106 ~ 25324440 (+) True AMCG00013230
AMCG00013225 mRNA upstream 102116 25231148 ~ 25255201 (+) True AMCG00013225
AMCG00013226 mRNA upstream 127301 25207547 ~ 25230016 (+) True AMCG00013226
AMCG00013227 mRNA upstream 162398 25180102 ~ 25194919 (+) True AMCG00013227
AMCG00013229 mRNA downstream 8970 25375516 ~ 25384472 (+) True AMCG00013229
AMCG00013234 mRNA downstream 55115 25421661 ~ 25423984 (+) True AMCG00013234
AMCG00013232 mRNA downstream 113312 25479858 ~ 25485620 (+) True AMCG00013232
AMCG00013236 mRNA downstream 146807 25513353 ~ 25521520 (+) True AMCG00013236
AMCG00013237 mRNA downstream 185049 25551595 ~ 25554794 (+) True AMCG00013237
TU53419 other upstream 587169 24768424 ~ 24770148 (+) True G42858
TU53407 other upstream 607922 24747492 ~ 24749395 (+) True G42846
TU52922 other upstream 3111527 22242429 ~ 22245790 (+) True G42453
TU52771 other upstream 3870509 21484907 ~ 21486808 (+) False G42344
TU53706 other downstream 153621 25520167 ~ 25521681 (+) False AMCG00013236
TU53847 other downstream 888433 26254979 ~ 26257842 (+) False AMCG00013255
TU53939 other downstream 1158280 26524826 ~ 26540049 (+) True G43263
TU54005 other downstream 1441618 26808164 ~ 26811615 (+) True G43309
TU54155 other downstream 1791756 27158302 ~ 27158721 (+) True G43434

Expression Profile