Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00013239 |
| length | 1437 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 5 |
| gene id | AMCG00013239 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 25526642 ~ 25537475 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005856 | cytoskeleton | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0030674 | protein-macromolecule adaptor activity | molecular_function |
| GO:0051015 | actin filament binding | molecular_function |
| id | description |
|---|---|
| K17455 | FSCN2; fascin2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU53713 | lncRNA | downstream | 6649 | 25518811 ~ 25519993 (-) | True | G43072 |
| TU53680 | lncRNA | downstream | 102568 | 25366266 ~ 25424074 (-) | True | G43042 |
| TU53610 | lncRNA | downstream | 150319 | 25079538 ~ 25376323 (-) | False | G42993 |
| TU53682 | lncRNA | downstream | 157579 | 25367598 ~ 25369063 (-) | True | G43044 |
| TU53674 | lncRNA | downstream | 174904 | 25289470 ~ 25351738 (-) | True | G43040 |
| TU53741 | lncRNA | upstream | 50439 | 25587914 ~ 25588261 (-) | True | G43100 |
| TU53740 | lncRNA | upstream | 51012 | 25588487 ~ 25592462 (-) | False | AMCG00013241 |
| TU53777 | lncRNA | upstream | 238899 | 25776374 ~ 25777679 (-) | False | AMCG00013245 |
| TU53779 | lncRNA | upstream | 238899 | 25776374 ~ 25777723 (-) | True | AMCG00013245 |
| TU53786 | lncRNA | upstream | 248668 | 25786143 ~ 25791759 (-) | True | AMCG00013246 |
| AMCG00013238 | mRNA | downstream | 13771 | 25508197 ~ 25512871 (-) | True | AMCG00013238 |
| AMCG00013240 | mRNA | downstream | 22126 | 25493377 ~ 25504516 (-) | True | AMCG00013240 |
| AMCG00013233 | mRNA | downstream | 108064 | 25385739 ~ 25418578 (-) | True | AMCG00013233 |
| AMCG00013235 | mRNA | downstream | 168141 | 25357680 ~ 25358501 (-) | True | AMCG00013235 |
| AMCG00013223 | mRNA | downstream | 359869 | 25162157 ~ 25166773 (-) | True | AMCG00013223 |
| AMCG00013241 | mRNA | upstream | 54984 | 25592459 ~ 25628252 (-) | True | AMCG00013241 |
| AMCG00013242 | mRNA | upstream | 147994 | 25685469 ~ 25685725 (-) | True | AMCG00013242 |
| AMCG00013245 | mRNA | upstream | 238925 | 25776400 ~ 25777647 (-) | False | AMCG00013245 |
| AMCG00013246 | mRNA | upstream | 250924 | 25788399 ~ 25790305 (-) | False | AMCG00013246 |
| AMCG00013247 | mRNA | upstream | 259745 | 25797220 ~ 25803654 (-) | True | AMCG00013247 |
| TU53711 | other | downstream | 9679 | 25516080 ~ 25516963 (-) | True | G43070 |
| TU53641 | other | downstream | 359884 | 25163983 ~ 25166758 (-) | False | AMCG00013223 |
| TU53623 | other | downstream | 448398 | 25075393 ~ 25078244 (-) | True | G43001 |
| TU53519 | other | downstream | 497638 | 25025876 ~ 25029004 (-) | False | AMCG00013216 |
| TU53481 | other | downstream | 624214 | 24882119 ~ 24902428 (-) | True | AMCG00013204 |
| TU53964 | other | upstream | 1018879 | 26556354 ~ 26557324 (-) | True | AMCG00013264 |
| TU54172 | other | upstream | 1735754 | 27273229 ~ 27293073 (-) | True | AMCG00013295 |
| TU54196 | other | upstream | 2031289 | 27568764 ~ 27569151 (-) | True | G43473 |
| TU54344 | other | upstream | 2530738 | 28068213 ~ 28072787 (-) | True | G43594 |
| TU54456 | other | upstream | 2929837 | 28467312 ~ 28467906 (-) | True | G43684 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000112_02887084_02894055.mRNA | True | 2417 | mRNA | 0.45 | 5 | CI01000112 | 2886674 ~ 2894589 (-) |
