RNA id: AMCG00013248



Basic Information


Item Value
RNA id AMCG00013248
length 399
RNA type mRNA
GC content 0.59
exon number 3
gene id AMCG00013248
representative False

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 25793405 ~ 25798013 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGCTCCCAAGGTGTGCTGCAGCTCGCACCTCCAGCAGCACCGACATTGACGCCTCGCCTGCTGCAAACAGCCGTAGGGTCCAACTGTGAGTCGTGTTGCAAAGTAGCAGCTCCCAGAGGCTTGGAGTGGTGTCCAGAGTTGGCCTTGGGGTACCGCGGGATCAGGTTCTCAATGCTCCCCCTGCAGCCCCTGACCTACTGTGTGCAGAGCACAGGAAGACAGCCCCCCGCAGGTCTGAGTCGAGGCTGGCAGCGATACTACAGCAGGTACATCGATGTGAGGAGAGGTGGAGTTGGGGGAGTGACCATGCTGCTGGCTGGATACTGCATTCTGTGCTACAGCTGGAACTACCCGCACCTCATCCCTGTGAACTGTGGCACATATGGAATGACGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU53726 lncRNA upstream 172166 25620937 ~ 25621239 (+) True G43085
TU53725 lncRNA upstream 173400 25619610 ~ 25620005 (+) True G43084
TU53723 lncRNA upstream 189167 25603998 ~ 25604238 (+) True G43082
TU53722 lncRNA upstream 192228 25600813 ~ 25601177 (+) True G43081
TU53721 lncRNA upstream 197464 25594697 ~ 25595941 (+) True G43080
TU53792 lncRNA downstream 10897 25807419 ~ 25844594 (+) True G43138
TU53839 lncRNA downstream 356714 26153236 ~ 26161139 (+) True AMCG00013251
TU53853 lncRNA downstream 462188 26258710 ~ 26258982 (+) False AMCG00013255
TU53875 lncRNA downstream 571273 26367795 ~ 26396705 (+) False AMCG00013257
TU53895 lncRNA downstream 652862 26449384 ~ 26478544 (+) False AMCG00013265
AMCG00013244 mRNA upstream 8433 25777912 ~ 25784972 (+) True AMCG00013244
AMCG00013243 mRNA upstream 17967 25746665 ~ 25775438 (+) True AMCG00013243
AMCG00013237 mRNA upstream 238611 25551595 ~ 25554794 (+) True AMCG00013237
AMCG00013236 mRNA upstream 271885 25513353 ~ 25521520 (+) True AMCG00013236
AMCG00013232 mRNA upstream 307785 25479858 ~ 25485620 (+) True AMCG00013232
AMCG00013251 mRNA downstream 359233 26155755 ~ 26161064 (+) False AMCG00013251
AMCG00013255 mRNA downstream 458452 26254974 ~ 26258950 (+) True AMCG00013255
AMCG00013252 mRNA downstream 463518 26260040 ~ 26312137 (+) True AMCG00013252
AMCG00013254 mRNA downstream 517764 26314286 ~ 26318743 (+) True AMCG00013254
AMCG00013253 mRNA downstream 525244 26321766 ~ 26363091 (+) True AMCG00013253
TU53706 other upstream 271724 25520167 ~ 25521681 (+) False AMCG00013236
TU53419 other upstream 1023257 24768424 ~ 24770148 (+) True G42858
TU53407 other upstream 1044010 24747492 ~ 24749395 (+) True G42846
TU52922 other upstream 3547615 22242429 ~ 22245790 (+) True G42453
TU52773 other upstream 4306597 21485321 ~ 21486808 (+) False G42344
TU53847 other downstream 458457 26254979 ~ 26257842 (+) False AMCG00013255
TU53939 other downstream 728304 26524826 ~ 26540049 (+) True G43263
TU54005 other downstream 1011642 26808164 ~ 26811615 (+) True G43309
TU54155 other downstream 1361780 27158302 ~ 27158721 (+) True G43434
TU54169 other downstream 1589143 27385665 ~ 27415286 (+) True AMCG00013298

Expression Profile