Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00013333 |
| length | 1176 |
| RNA type | mRNA |
| GC content | 0.61 |
| exon number | 8 |
| gene id | AMCG00013333 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 28611303 ~ 28623511 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| ko04721 | Synaptic vesicle cycle |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU54444 | lncRNA | upstream | 221343 | 28389689 ~ 28389960 (+) | True | G43673 |
| TU54325 | lncRNA | upstream | 538504 | 28068646 ~ 28072799 (+) | True | AMCG00013317 |
| TU54159 | lncRNA | upstream | 1193516 | 27270028 ~ 27417787 (+) | True | G43438 |
| TU54122 | lncRNA | upstream | 1600652 | 27010372 ~ 27010651 (+) | True | G43402 |
| TU54035 | lncRNA | upstream | 1706340 | 26897509 ~ 26904963 (+) | True | AMCG00013286 |
| TU54481 | lncRNA | downstream | 57299 | 28680810 ~ 28682174 (+) | True | AMCG00013336 |
| TU54482 | lncRNA | downstream | 57299 | 28680810 ~ 28682174 (+) | False | AMCG00013336 |
| TU54489 | lncRNA | downstream | 114612 | 28738123 ~ 28738753 (+) | True | G43712 |
| TU54625 | lncRNA | downstream | 526467 | 29149978 ~ 29151334 (+) | True | G43810 |
| TU54612 | lncRNA | downstream | 533188 | 29156699 ~ 29158493 (+) | True | G43799 |
| AMCG00013334 | mRNA | upstream | 908 | 28610105 ~ 28610395 (+) | True | AMCG00013334 |
| AMCG00013335 | mRNA | upstream | 4420 | 28599903 ~ 28606883 (+) | True | AMCG00013335 |
| AMCG00013330 | mRNA | upstream | 29049 | 28566098 ~ 28582254 (+) | True | AMCG00013330 |
| AMCG00013329 | mRNA | upstream | 127325 | 28464362 ~ 28483978 (+) | True | AMCG00013329 |
| AMCG00013327 | mRNA | upstream | 267816 | 28322909 ~ 28343487 (+) | True | AMCG00013327 |
| AMCG00013336 | mRNA | downstream | 53031 | 28676542 ~ 28686138 (+) | False | AMCG00013336 |
| AMCG00013337 | mRNA | downstream | 80536 | 28704047 ~ 28716412 (+) | True | AMCG00013337 |
| AMCG00013338 | mRNA | downstream | 104062 | 28727573 ~ 28733671 (+) | True | AMCG00013338 |
| AMCG00013340 | mRNA | downstream | 172235 | 28795746 ~ 28799306 (+) | True | AMCG00013340 |
| AMCG00013341 | mRNA | downstream | 218241 | 28841752 ~ 28914840 (+) | True | AMCG00013341 |
| TU54454 | other | upstream | 122520 | 28484273 ~ 28488783 (+) | True | G43682 |
| TU54319 | other | upstream | 675365 | 27934074 ~ 27935938 (+) | False | AMCG00013310 |
| TU54201 | other | upstream | 1020485 | 27589139 ~ 27590818 (+) | True | G43476 |
| TU54169 | other | upstream | 1196017 | 27385665 ~ 27415286 (+) | True | AMCG00013298 |
| TU54155 | other | upstream | 1452582 | 27158302 ~ 27158721 (+) | True | G43434 |
| TU54615 | other | downstream | 480778 | 29104289 ~ 29104577 (+) | True | G43802 |
| TU54772 | other | downstream | 1017112 | 29640623 ~ 29658948 (+) | False | AMCG00013364 |
| TU54850 | other | downstream | 1297556 | 29921067 ~ 29928697 (+) | False | AMCG00013375 |
| TU55045 | other | downstream | 1595399 | 30218910 ~ 30222209 (+) | False | AMCG00013396 |
| TU55098 | other | downstream | 1867316 | 30490827 ~ 30495656 (+) | True | AMCG00013416 |
