Item | Value |
---|---|
RNA id | AMCG00013338 |
length | 1113 |
RNA type | mRNA |
GC content | 0.64 |
exon number | 8 |
gene id | AMCG00013338 |
representative | True |
Item | Value |
---|---|
chromosome id | CM030125.1 |
NCBI id | CM030125.1 |
chromosome length | 49972098 |
location | 28727573 ~ 28733671 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
species | bowfin (Amia calva) |
id | name | namespace |
---|---|---|
GO:0090305 | nucleic acid phosphodiester bond hydrolysis | biological_process |
GO:0006281 | DNA repair | biological_process |
GO:0004519 | endonuclease activity | molecular_function |
id | description |
---|---|
K21813 | ENDOV; endonuclease V |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU54481 | lncRNA | upstream | 45399 | 28680810 ~ 28682174 (+) | True | AMCG00013336 |
TU54482 | lncRNA | upstream | 45399 | 28680810 ~ 28682174 (+) | False | AMCG00013336 |
TU54444 | lncRNA | upstream | 337613 | 28389689 ~ 28389960 (+) | True | G43673 |
TU54325 | lncRNA | upstream | 654774 | 28068646 ~ 28072799 (+) | True | AMCG00013317 |
TU54159 | lncRNA | upstream | 1309786 | 27270028 ~ 27417787 (+) | True | G43438 |
TU54489 | lncRNA | downstream | 4452 | 28738123 ~ 28738753 (+) | True | G43712 |
TU54625 | lncRNA | downstream | 416307 | 29149978 ~ 29151334 (+) | True | G43810 |
TU54612 | lncRNA | downstream | 423028 | 29156699 ~ 29158493 (+) | True | G43799 |
TU54679 | lncRNA | downstream | 443380 | 29177051 ~ 29178266 (+) | False | G43853 |
TU54680 | lncRNA | downstream | 443380 | 29177051 ~ 29178266 (+) | False | G43853 |
AMCG00013337 | mRNA | upstream | 11161 | 28704047 ~ 28716412 (+) | True | AMCG00013337 |
AMCG00013336 | mRNA | upstream | 41435 | 28676542 ~ 28686138 (+) | False | AMCG00013336 |
AMCG00013333 | mRNA | upstream | 104062 | 28611303 ~ 28623511 (+) | True | AMCG00013333 |
AMCG00013334 | mRNA | upstream | 117178 | 28610105 ~ 28610395 (+) | True | AMCG00013334 |
AMCG00013335 | mRNA | upstream | 120690 | 28599903 ~ 28606883 (+) | True | AMCG00013335 |
AMCG00013340 | mRNA | downstream | 62075 | 28795746 ~ 28799306 (+) | True | AMCG00013340 |
AMCG00013341 | mRNA | downstream | 108081 | 28841752 ~ 28914840 (+) | True | AMCG00013341 |
AMCG00013342 | mRNA | downstream | 185082 | 28918753 ~ 28936041 (+) | True | AMCG00013342 |
AMCG00013343 | mRNA | downstream | 235857 | 28969528 ~ 28970154 (+) | True | AMCG00013343 |
AMCG00013345 | mRNA | downstream | 270374 | 29004045 ~ 29011275 (+) | True | AMCG00013345 |
TU54454 | other | upstream | 238790 | 28484273 ~ 28488783 (+) | True | G43682 |
TU54319 | other | upstream | 791635 | 27934074 ~ 27935938 (+) | False | AMCG00013310 |
TU54201 | other | upstream | 1136755 | 27589139 ~ 27590818 (+) | True | G43476 |
TU54169 | other | upstream | 1312287 | 27385665 ~ 27415286 (+) | True | AMCG00013298 |
TU54155 | other | upstream | 1568852 | 27158302 ~ 27158721 (+) | True | G43434 |
TU54615 | other | downstream | 370618 | 29104289 ~ 29104577 (+) | True | G43802 |
TU54772 | other | downstream | 906952 | 29640623 ~ 29658948 (+) | False | AMCG00013364 |
TU54850 | other | downstream | 1187396 | 29921067 ~ 29928697 (+) | False | AMCG00013375 |
TU55045 | other | downstream | 1485239 | 30218910 ~ 30222209 (+) | False | AMCG00013396 |
TU55098 | other | downstream | 1757156 | 30490827 ~ 30495656 (+) | True | AMCG00013416 |