RNA id: AMCG00013361


Basic Information

Item Value
RNA id AMCG00013361
length 1322
RNA type mRNA
GC content 0.51
exon number 9
gene id AMCG00013361
representative True

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 29445941 ~ 29449481 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATTAGACAGACTTCCTACATTAAAAGGTGTGTGTTCTTCCTCTAGCTTGTTTTAAAATTTTAACATGGGATAGGATTGAGGATGTTGGGTTGCTTTTAACCGGTCCTTGGAGAGtgtgtgtgcagggtcCATAAGCTGCCGGCCGTCCCATATTGGAGCTCACAGTGGACACAAACCCTTGACTGCGAAGATGCTGCGAGGATTAGCGCTGCTGTTGCTCTGTGAGGCGTCTCTCTTCACTGCCGTGACGCCAGTGAAAGTGTGCGGTCGCCCCCCGGAGGTGGAGAACGCGCAGCTGGAGGACGAGCGGCGGGTATATGAGGCGGGCGAGGAGGTCTTCTACACCTGTCTGCCGGGGTACGCCATTGCCGCGGGCTCCAGGAAGTCCATCTGCACGTTGCAAGGGACCTGGAGCCAGTCCAAGCTGAAATGCAAACCAAAATCCTGCTCCGTTCCCGGACCGCTGGCGAATGGACGGATACGTTTCGCCAGCATCCATTTTAAGAGCACCATCAACTTCACCTGCGATGAAGGGTATGTCCTTCATGGAGAAGAGAGAAGCCATTGCCAGCATGATGGTACATGGAGCCCACCATTGCCCGTCTGTCAAGCCGTAACCTGTGGCCTGCCGGGAATACCCCAATATGGAAGGATGATCCACACCAAGATGTTCTCGGACAACACAACGCAGTTTGGAGACACGGTGCGGTACGACTGCTCCCCACCGTACGTCCTGTTCGGGAGCGAGATCGGGACGTGTCAGGCCAACGGGAACTGGACAGAAATGCCAGAGTGCCGGGTGGTTACCTGCCCCTACCCTCCTAAAATACAGAACGGGTTTATGCAGTTTGCTGTTATGAGAGAGCACGGCTACCAAGAAAGTATAAAGTATGGATGCAATCCAGAGTATTTTCTGGATGGTCCAAGTGAAATCCGCTGCGAGAAAACTGGCAGCTGGTCCGTGCTGCCGGTCTGCAGAGCATCCTGCATCGTTGGTATTCAAAGGGGGCGGATCTTTTATAACGCCAAAAAAATATGGATTGAAGATCTGCCCCAGAAGAAGGTGCAGCACTCTGATCACGTGGCATTTTACtgcaaaaacaaggaaaagaaTTGCGGGTACCCTGTCGTGACCCAGTGTTTCGACGGCACTCTGAAAATCCCTGAATGCTTTGAAGaaCCAAGTGCAATGACGTATAAATTCCAGTCCAAGAAATTACCATCGGAAATACAGATGTGCTGAAGCAGTGAAATCAACAtcttgcaaaaataataaataaaagagcgAAACCTGGAACAATAAAGTGTCTTTTCATACTGTG

Function

GO: NA

KEGG:

id description
K17305 APOH, B2G1; beta-2-glycoprotein 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU54650 lncRNA downstream 324622 29119373 ~ 29121319 (-) True G43831
TU54654 lncRNA downstream 327980 29115222 ~ 29117961 (-) True G43834
TU54656 lncRNA downstream 327980 29115222 ~ 29117961 (-) False G43834
TU54511 lncRNA downstream 707168 28737957 ~ 28738773 (-) True G43725
TU54508 lncRNA downstream 728001 28716291 ~ 28717940 (-) True G43724
TU54758 lncRNA upstream 48229 29497710 ~ 29499573 (-) True G43919
TU54896 lncRNA upstream 476902 29926383 ~ 30028230 (-) True G44034
TU54893 lncRNA upstream 489667 29939148 ~ 29944587 (-) False G44034
TU54897 lncRNA upstream 501359 29950840 ~ 30010700 (-) False G44034
TU54905 lncRNA upstream 590724 30040205 ~ 30061634 (-) True AMCG00013384
AMCG00013362 mRNA downstream 69 29444447 ~ 29445872 (-) True AMCG00013362
AMCG00013360 mRNA downstream 5471 29439999 ~ 29440470 (-) True AMCG00013360
AMCG00013359 mRNA downstream 141915 29282664 ~ 29304026 (-) True AMCG00013359
AMCG00013358 mRNA downstream 207684 29233172 ~ 29238257 (-) True AMCG00013358
AMCG00013357 mRNA downstream 243873 29178328 ~ 29202068 (-) True AMCG00013357
AMCG00013373 mRNA upstream 296746 29746227 ~ 29794126 (-) True AMCG00013373
AMCG00013372 mRNA upstream 347102 29796583 ~ 29803243 (-) True AMCG00013372
AMCG00013376 mRNA upstream 482169 29931650 ~ 29935170 (-) True AMCG00013376
AMCG00013385 mRNA upstream 541819 29991300 ~ 30002882 (-) True AMCG00013385
AMCG00013384 mRNA upstream 593109 30042590 ~ 30047619 (-) False AMCG00013384
TU54700 other downstream 191625 29253396 ~ 29254316 (-) True G43869
TU54456 other downstream 978035 28467312 ~ 28467906 (-) True G43684
TU54344 other downstream 1373154 28068213 ~ 28072787 (-) True G43594
TU54196 other downstream 1876790 27568764 ~ 27569151 (-) True G43473
TU54172 other downstream 2152868 27273229 ~ 27293073 (-) True AMCG00013295
TU54894 other upstream 557283 30006764 ~ 30010700 (-) False G44034
TU54953 other upstream 631555 30081036 ~ 30083345 (-) False AMCG00013386
TU54954 other upstream 631555 30081036 ~ 30083345 (-) True AMCG00013386
TU55007 other upstream 716336 30165817 ~ 30169136 (-) False AMCG00013390
TU55119 other upstream 838811 30288292 ~ 30290867 (-) False AMCG00013405

Expression Profile